Polyodon spathula (Mississippi paddlefish): 121300812
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Entry
121300812 CDS
T07273
Name
(RefSeq) F-box/LRR-repeat protein 16-like
KO
K10282
F-box and leucine-rich repeat protein 16
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121300812
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
121300812
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_8
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
121300812
NCBI-ProteinID:
XP_041085627
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All DBs
Position
26:12804993..12833249
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AA seq
487 aa
AA seq
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MLKMTTPNNLKSPCVPRNGLVKLPAQPNCLGSASITKGTPAAKNRLCQSSSVPTILPPAS
LPCHMEPLPATASLLAGDPDDVSPTSDQPPCRKLSKPSLERQLVLDEKVLNRLLWYFATV
EKCILAQVCKTWRKVLYQPKFWEGVTPILHAKELYSLLPGGEKQFVSLQAFALRGFHSFC
LVGVSDLDICEFIDNYPLSKKGVRSVSLKRSTITDAGLEVMLEQMQGLVHLELSGCNDFT
EAGLWSSLNARLTSLSVSDCINVADDAIAAISQLLPNLSELSLQAYHVTDTAMAYFTAKQ
GYTTHTLRLHSCWEITNHGVVNMVHSLPNLTALSLSGCSKITDDGVELVAENLRKLRSLD
LSWCPRVTDMALEYIACDLHKLEELILDRCVRITDTGLGYLSTMSSLRSLYLRWCCQVQD
FGLQHLFGMRSLRLLSLAGCPLLTTTGLSGLIQLQDLEELELTNCPGATPELFKYYSQHL
PRCMVIE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagatgaccactcccaacaacctcaagtcaccctgtgtgccgaggaacggcttg
gtcaagcttccggcccagcccaactgtcttggctcagccagcatcaccaaagggacccca
gcggccaaaaaccgcctgtgccagtcctcctccgtgcccaccatcctgcctcctgccagc
ctgccatgccacatggagcccctgcccgccactgcatccctcctggcaggcgacccagat
gatgtctcccccacttcagaccagcccccttgcaggaagctttccaagccctccctggag
cgacagctggtgctggacgagaaggttctcaaccggctgctctggtacttcgccacggtg
gagaagtgcatcctggcccaggtgtgtaagacctggaggaaggttctctaccagcccaag
ttctgggaaggggtgacgcccatcctgcatgccaaggagctctacagcctcctgcccggc
ggagagaagcagtttgtcagcctgcaagccttcgccctgcgcgggttccactccttctgc
ctggtgggggtctctgacttagacatttgtgagttcattgacaactaccccctctccaag
aagggagtcaggtccgtcagtctgaaacggtcaaccatcacagatgccggcttagaggtg
atgctggagcagatgcagggcctggtgcacctggagctgtctggctgcaatgacttcaca
gaggcggggctgtggtccagcctgaacgcgcggctcacctccctgagcgttagcgattgc
atcaatgtggcggatgatgccatcgctgccatctcccagctcctgcccaacctgtccgag
ctgagcctgcaggcctaccacgtgactgacacagccatggcctacttcactgccaagcag
ggctacaccacccacacgctgcgcctgcactcctgttgggagatcaccaaccacggcgtg
gtcaacatggtgcacagcctgcccaacctcaccgccctcagcctgtcaggctgctccaag
atcaccgatgacggcgtggagctggtggcggagaaccttcgcaagctgcgcagcctagac
ctgtcctggtgcccccgcgtcacagacatggcgctggagtacatcgcctgtgacctacac
aagcttgaggagctcatactggacaggtgtgttcggatcacagatacaggtctcgggtac
ctctccaccatgtcatccctccgcagcctctacctgaggtggtgctgccaggtacaagat
ttcgggttacaacacctctttgggatgagaagtttacgcctcctgtctttagcaggctgt
ccattgctgaccactaccgggctgtcaggtctcattcagcttcaggacttggaagaactg
gaactgaccaactgcccaggggccactcctgagctcttcaagtactattcgcagcacctg
ccccggtgcatggtcatcgagtag
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