Polyodon spathula (Mississippi paddlefish): 121300842
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Entry
121300842 CDS
T07273
Name
(RefSeq) ras-related protein Rab-11B
KO
K07905
Ras-related protein Rab-11B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121300842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121300842
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121300842
04031 GTP-binding proteins [BR:
pspa04031
]
121300842
Membrane trafficking [BR:
pspa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
121300842
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121300842
Exosomal proteins of other body fluids (saliva and urine)
121300842
Exosomal proteins of colorectal cancer cells
121300842
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
121300842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_22
PduV-EutP
ABC_tran
AAA_16
Csa3_N
AAA_14
Gtr1_RagA
NTPase_1
TniB
AAA_24
DUF3289
FeoB_N
FAD-SLDH
SRPRB
AAA_21
AAA_5
Motif
Other DBs
NCBI-GeneID:
121300842
NCBI-ProteinID:
XP_041085700
LinkDB
All DBs
Position
26:complement(18506071..18509805)
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AA seq
218 aa
AA seq
DB search
MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
ITDRSVHDESPGNNVVDISVPPTTDGQRPNKLQCCQNL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccagagacgacgagtatgattatttattcaaagtggtgctgatcggtgactct
ggggtgggaaagagtaacctgctttcccgattcacacgcaacgagttcaacctggagagc
aagagcaccatcggggtggagttcgccacccgcagcatccaggtggacggcaagacgata
aaggctcagatctgggacacagccgggcaggagcgctaccgagccatcacgtcggcgtac
taccggggtgcggtgggtgctctgctggtctatgacatcgccaagcacctgacctacgag
aacgtggagcgctggttgaaggagctgcgggaccacgctgacaacaacatcgtcatcatg
ctggtgggcaacaagagcgacctgcggcacctgagggctgtgcccaccgacgaggcccgt
gcctttgcagaaaagaatactttatcatttattgaaacctctgccctggactcgaccaat
gtggaggaggcattcaaaaatatcctgacagagatttaccggattgtatcgcagaagcag
atcactgaccgatcggtgcatgacgagtctcctggcaacaacgtggtggacatcagcgtt
ccgcccaccacagatggccagagacccaacaaactgcaatgctgccaaaacctgtga
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