Polyodon spathula (Mississippi paddlefish): 121300845
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Entry
121300845 CDS
T07273
Name
(RefSeq) protein CLEC16A-like isoform X1
KO
K19513
protein CLEC16A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121300845
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121300845
Membrane trafficking [BR:
pspa04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
121300845
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
121300845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLEC16A_C
FPL
Flu_NS2
Motif
Other DBs
NCBI-GeneID:
121300845
NCBI-ProteinID:
XP_041085704
LinkDB
All DBs
Position
26:16019959..16064315
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AA seq
1006 aa
AA seq
DB search
MFGRSRSWVVAGQGKSKSIHSLDHLKYMYHVLTKNTTVTDHNRNLLIETIRSITEILIWG
DQNDSSVFDFFLEKNMFAFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSNN
HVNSIIVHKFDFSDEEIMAYYISFLKTLSLKMNNHTVHFFYNEHSNDFALYTEAIKFFNH
SESMVRIAVRTITLNVYKVSLDNQLMLHYIRDKTAVPYFSNLVWFIGSHVIELDNCVQTD
EEHRNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLTDHLLNRLFLPLYVYSLVNHEQ
AKLLPLVSRHGTCPYLHVSTKQLLQSGDRPKISSQVSLYLLSQVFLIIHYAPLVNSLADV
ILNGDLSVFSLQAEQDVQKSCATTSVRRFTKPAESLERSLEINRQRGRKKVQKRPNYKNV
GEDEEDEKGPDEAQEDPDKAKGTEASSKGNKTSGDNEEIEMVIMERCKISEKSGFTEQNT
TDEEKTAAAAAAGIEVQKSRPFLDMVYNALDCSTDDYYALFVLCLLYAMSHSKGISSQLL
EKIQLPAQQVERSSYSHVLAEWLIRIMNQAAQPDGKIRLATLELSCLLLKQLVQSSSDCI
IKDVHLACLEGAKEESIHLLRRFYKGDEIFLDMFEDEHRSMTSKPLNVEYLMMDASILLP
PTGTPLTGIDFVKRLPCGDVERTRRAIRVFFMLRSLSLHLRSEPETQLPLTREEDLIQTD
DVLDLNNSDLIACMVVWKDGGQAQRFLAVDLYQMSLVEPETKRLGWGVVKFAGLLQDMQV
TGVEDDSRALNIIIHKPTSNPHAKPFPILQANFIFADHIRCIIAKQRLAKGRILARRTKM
QRIAVLLDLPVQPSADVLGFPRSSAASSQHLPFRFYEQSRRGLSDSTVQRSVFASVDKVP
GFAVAQCINQHSPSQMPSPSSLSSGSGSGSGSTGRCDSIAASTISTPSATQSPSGQEILT
ECIQAVLLVSNMAMCVFLNCWSSHRFKNTQTNMHWHISTVISKHLS
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacggtctagaagctgggtcgtagcagggcaagggaagtctaaaagcattcat
tctctggaccacctgaaatacatgtaccatgtcctgacgaagaataccacagtgacggat
cataaccgcaacctcctcattgagaccatccggtccataacggagattctgatctggggc
gatcagaatgacagctcagtgttcgacttctttttggagaagaacatgttcgctttcttt
ctgaacatcctgcggcagaagtctggccgctacgtgtgtgtgcagctcctgcagacgctg
aatatcctgtttgaaaacatcagccacgagacgtctctctattatctgctgtccaacaac
cacgtcaattccattatcgtgcacaaatttgacttttctgatgaggagatcatggcgtac
tacatctccttcctgaagacactgtcactgaaaatgaacaaccacactgtgcatttcttt
tataacgagcacagtaatgattttgccctgtacaccgaggccattaagttcttcaaccac
tcggagagcatggtccggattgcagtcaggaccatcacccttaacgtgtacaaagtgtca
ttggacaaccagctcatgctgcactatatcagagacaagacggctgttccctacttctcc
aacctggtctggttcataggaagccatgtgattgagctggataactgtgtgcagacagat
gaagagcacagaaaccgtggcaagctcagtgacttggtggcagagcacctggatcacctg
cactatctcaatgatatcctgattattaactgtgaattcctcaatgacgtgctgacagac
cacctgctcaacaggctctttctgcccctttatgtttactccttggtgaaccacgagcag
gccaagcttcttcctttggtatccagacacggtacctgcccttatctccatgtttcaaca
aaacagctgctacagagtggagatcgcccaaagatcagctctcaggtgtccctttacctc
ctctcacaggtgtttcttataatccactatgctccgctggtgaactccttggcagatgtt
attttgaacggagatctctctgtgttttccctgcaagctgagcaggacgtacagaaaagc
tgtgcgaccacgagcgtccggcgcttcacgaagcctgcagagagcttggaaagatcactg
gaaataaaccgtcaaagaggaagaaagaaggtgcagaaaagaccaaactacaagaatgtg
ggggaggatgaggaagacgagaaagggcccgacgaggcccaggaagacccagacaaggct
aaaggtacagaggctagttcaaaaggcaacaagacaagtggagacaacgaagagatagag
atggtaataatggagaggtgtaagatttctgagaagtctgggtttacggaacagaacacg
acggatgaggagaagacggcagcggctgcagctgctgggatcgaggtccagaagagcaga
ccctttctggatatggtttataatgcactagactgctcaacggacgactactatgccctc
tttgtcctctgtctcctgtacgccatgtcccacagtaaaggtatctcctcacagctgctg
gagaagatccagctcccagcacagcaggtagagaggagttcgtacagccatgtgctggca
gagtggctcatcaggatcatgaaccaggcagcacagccagatgggaagattcgcttggcg
accctggagctgagctgtctcttgctgaagcagctggtgcagtccagcagtgactgcatc
attaaagacgttcacctcgcctgcttggagggggccaaagaggagagtattcacctgctg
cgacgcttctataagggagacgaaattttcctggatatgtttgaagatgaacacaggagt
atgacaagtaaaccgttgaatgtcgagtacctgatgatggacgcctccatcctccttccc
cccacgggaacccctctgacggggattgactttgtgaagagactgccctgtggagacgtg
gagaggaccaggagggcaatccgggtgttcttcatgctgcgctccctgtcgctgcatttg
aggtccgagcccgagactcagcttccactgaccagagaggaggacctgatccaaaccgac
gacgtgctcgacctgaataacagtgacctgatcgcctgcatggtggtctggaaggacggg
gggcaggcccagcgcttcctggctgtggacctgtaccagatgagcctggtggagcccgag
accaagcgcctgggctggggggtcgtcaagtttgccggcctgctgcaggacatgcaggtg
acgggggtggaggatgacagccgggccctgaacatcatcatccacaagcccacctcgaac
ccgcacgccaagcccttccccatcctgcaggccaacttcatcttcgccgaccacatccgc
tgtatcatagccaagcagcggctggccaaggggcgcatcctggcacggcgcacgaagatg
cagaggatagccgtgctgctggacctccctgtccagccctcggcagatgtcctgggtttc
cctcggagttcggcagcatcttctcagcacctgcccttccgcttctacgagcagtcccgc
cgtgggctgagcgactccaccgtgcagcgctcagtcttcgcctctgtggacaaggtccca
ggctttgcggtggcccagtgtataaaccagcacagtccctcccagatgccgtcaccctcc
tccctgtccagcgggagtgggagtgggagtgggagcactgggcgctgcgactccatcgca
gccagcactatctccactccctcagccacgcagagcccctccggacaagagattctgaca
gagtgcatccaggctgtgctgctggtctccaacatggctatgtgtgtgtttcttaactgc
tggtcaagccatcgcttcaaaaacacacaaacaaacatgcattggcacataagcacagtg
atctcaaaacatctcagttga
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