Polyodon spathula (Mississippi paddlefish): 121300852
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Entry
121300852 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121300852
04121 Ubiquitin system [BR:
pspa04121
]
121300852
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121300852
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121300852
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121300852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
zf-RING-like
zf-RING_Vps41
HypA
zinc_ribbon_16
C1_2
EHMT1-2_CRR
DZR
U-box_ZFPL1
DZR_2
DUF3678
PHD
Motif
Other DBs
NCBI-GeneID:
121300852
NCBI-ProteinID:
XP_041085727
LinkDB
All DBs
Position
26:complement(17423880..17433752)
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AA seq
312 aa
AA seq
DB search
MAEAPTRPGRFFCHRCSAEISPHLPDYTCPRCESGFIEELPEERSTENGSTSSASTSDQN
RHQFETLDQHMFTFPPGYGQFALGIFDENFEFGSGPPSEDNRETENRRERELASRQRYGA
RQPRARHMARRQTGRHEGVPTLEGIIQQLVNGIIAPTAIPNIGLGPWGMLHSNPMDYAWG
VNGLDAVITQLLNQFENTGPPPADRDKIKSLPTVQVTEEHVGSGLECPVCKEDYTAGESV
RQLPCNHMFHNDCIVPWLEQHDTCPVCRKSLSGQNTATNPPGLSGMNFSSSSSSSSSSSS
SSPGNENMTNNS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctcccacaagaccaggtcggtttttctgtcaccgctgctcggcggagatc
agcccgcatctcccggattacacctgcccgaggtgtgagtctgggtttatcgaagaatta
cctgaagagagaagcactgaaaatggttccacctcttcagcctctaccagtgatcaaaac
cgacaccagtttgagaccctggaccagcacatgttcacctttccccccggctatgggcag
tttgcgctggggatttttgacgagaactttgagttcggttcagggccgccctcggaagac
aacagggagacggagaaccgcagggagagggagttggcgtcgaggcagcgttatggtgcc
aggcaacccagggcgcggcacatggcaagacggcagacagggaggcacgagggggttccc
actttagaaggaattatccagcagttagtgaatggaattatagcacctacagccattcca
aacataggactgggaccctggggtatgttgcactcaaacccaatggactatgcatggggg
gtgaatggacttgatgcagttataacacagttattaaatcagtttgaaaacaccggcccc
cctccagcagacagagataaaattaagagcctccccacagtgcaggttacagaagaacat
gtaggttcaggtctagaatgtcctgtctgtaaagaagattacaccgcaggagaaagtgta
aggcagctcccgtgcaatcacatgtttcacaatgattgtatagtaccttggcttgaacag
cacgacacgtgtccagtttgcaggaaaagtttaagtggacagaacacagctacgaatccg
cctgggttatctgggatgaatttctcctcatcctcctcatcatcctcctcctcttcctcc
agttctcccggcaacgagaacatgacgaataactcctaa
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