Polyodon spathula (Mississippi paddlefish): 121300875
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Entry
121300875 CDS
T07273
Symbol
flr
Name
(RefSeq) tetratricopeptide repeat protein 30A
KO
K19683
tetratricopeptide repeat protein 30
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121300875 (flr)
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
121300875 (flr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_12
TPR_1
ANAPC3
TPR_CcmH_CycH
ARM_TT21_C
TPR_8
TPR_6
TPR_Slam
DASH_Dad2
TPR_11
BEX
Motif
Other DBs
NCBI-GeneID:
121300875
NCBI-ProteinID:
XP_041085764
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All DBs
Position
26:complement(12714205..12728634)
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AA seq
651 aa
AA seq
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MTMAQIKDGEYTATIYKMIRDGRHGEAIQILSNEIQKQPKSRAALSLLGYCYYHIQDFNS
SADCYEQLTQIHPEVEDYRLYYAQSLYKACLYTDAMKATFLLDNQGYHTKMLKLQAAIKY
GEEDLSGAKSLVEQLPSDDPDSEINLGCLLYKEGEYEEACKKFSSAMQVMGYQPDLSYNI
ALCYYSMKQYAPALKHIADIIERGIREHPELSVGMTTEGIDVRSVGNTLVLHETALIEAF
NLKAAIEYQLKNYDAAQEALTDMPPRSEEELDPVTLQNQALMNMDSKPTEGFEKLQFLLQ
QNPFPPETFGNLLLLYIKYEYFDLAADVLAENAHLTYKSLSPYLYEFLDAMITCQTAPEE
AFRKFDEMAAKLTEQLRKLTKQVQEARHNRDDEAVKRAVNEYDEALEKYIPVLMVQAKIY
WNLENYQMVEKIFRKSVEFCNEHDVWKLNVAHVLFMQENKYKEAIGFYEPIVKKHYDNIL
NVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQISYDDPDKKVYHLCIVNLVIGTLY
CAKGNYDFGISRVIKSLEPYNKKLGTDTWYYAKRCFLSLLENMSKHMIMLRDSVVQECIQ
FLEHCEVYGKNVPALIEQPLEEERMHIGKNTVTYESRLLKALIYEIIGWNQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggcgcaaattaaggacggcgaatacaccgcaaccatctacaaaatgataaga
gatggaagacatggagaagccatccaaattctgagcaatgaaatacagaaacagcctaaa
tctagggcagccctctcccttttgggatactgttactatcacattcaggactttaacagc
tctgctgactgctatgagcagctcacacaaattcacccagaggtcgaggactacagactc
tactatgcccagtccctgtacaaggcctgcctttatacagatgctatgaaagctacattt
cttctggacaaccaagggtatcatactaagatgttaaagctccaagcagctatcaagtac
ggagaagaggacctttctggagctaagagtctagtggagcagctgccctccgatgatcca
gacagtgagattaacctgggatgtttactctacaaggaaggagagtatgaggaggcctgc
aaaaagtttagctctgccatgcaagtcatgggctatcaaccagatttgtcgtacaacatt
gccctttgttactacagtatgaagcagtatgctcctgccttgaagcacattgcagacata
attgaacgtggaattagagagcacccagaactgagtgttggcatgacaacagaaggtatc
gatgtaaggagtgttggcaacacgcttgtgctgcatgaaacagcattgatcgaagcattt
aatcttaaggcagccattgagtaccaactgaaaaactatgatgcagcccaggaagccttg
acagacatgcccccacgttccgaggaggagctcgatccagtgactctgcaaaaccaagcc
ttaatgaatatggattccaaacccacagaaggttttgagaagttgcaatttctcctgcag
cagaatcctttccccccagagacctttggaaacctcctgctcctctacattaaatatgaa
tattttgacctggctgcagatgttctagctgaaaatgcacatcttacttacaaatccctc
tcaccgtatttatatgagtttttggacgccatgataacatgtcaaactgccccagaagag
gcattccgaaagtttgatgaaatggcagctaaactgacagagcagctgcgtaaactgaca
aagcaggtgcaagaagcaagacacaatcgtgatgacgaagctgtgaaaagagctgtaaat
gagtatgacgaggctcttgagaagtacatcccagtgctgatggttcaggccaagatctac
tggaacctggagaattaccagatggtggagaagatctttcgcaaatctgtggagttctgc
aatgagcatgacgtgtggaaactgaatgtagcacacgtcctcttcatgcaggagaacaaa
tacaaagaggccattggtttctacgagcccatcgttaaaaaacactatgataacatcctg
aacgtgagtgcaatcgtcctggctaatctctgcgtctcttacatcatgaccagccaaaac
gaagaggctgaagagttgatgagaaaaattgaaaaagaagaggagcagatatcctatgat
gacccagacaagaaggtctatcacctctgcattgtgaaccttgtgattgggaccctatac
tgtgctaaaggtaattacgattttggaatttctcgggtaattaagagtttggagccatac
aacaaaaagcttgggacagacacctggtactatgccaagcgctgcttcttgtccctacta
gaaaacatgtcgaaacacatgatcatgttacgggacagcgtcgtacaagaatgtatccag
ttcctggaacactgtgaagtttatggaaaaaatgtcccagctctcattgagcagcccctg
gaggaggaacgaatgcacattggaaagaacacagttacgtatgaatctcgccttctgaaa
gcactcatctatgaaattatcggatggaatcaataa
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