Polyodon spathula (Mississippi paddlefish): 121300900
Help
Entry
121300900 CDS
T07273
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121300900
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121300900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Motif
Other DBs
NCBI-GeneID:
121300900
NCBI-ProteinID:
XP_041085803
LinkDB
All DBs
Position
26:complement(18994479..19037984)
Genome browser
AA seq
1025 aa
AA seq
DB search
MRLVLVKTANEAGRLDSTGAFHDEGVLEQYHAGEQQDGAVEGMQHRHPGAVFQHHPLSQQ
PSGVNSSASHPQKPPSQEGSGASVQNRIPLSNCPPPPLFRQGSAAFLQQNQQEPPSSNPF
TQPGTIPPYYRLPPPPPPPRRNHVTGQRGQNQNQACCFSVQPLSLQQNRGAATTAAAAGV
TSQQKEHFYQSHCYSNCGYSRQASPNQHQNHLPQLSTTATTTPPILQHQNSNRGDHLQNA
SNYQRQQHPSSSVCRRREGGLGEQNRLQQQPQHHNQSNLHQHPSYCLAAPQEQNLEQQSK
DSGPLEVKRQFYLFQQQPRDWQPPPPLLQQRQQRLGSSQYNNYCTDGSGGEDINLLLQLQ
EQEQPHLFQQPQPPQHCDNYSKKPLERHCCQYPQQDKQPNSHRQEPSRPLFGNLSGGSSS
SSGCSDNERSLSYSSNTCLWRQQHQEGNQIPTEQQQVNAEPKKLSHAGSKPSVCDSSNPL
PEIAMNSCKYNGGVVRPLGSLGSSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGEDPGK
VSSDSLSHDGGGAPQKKNKDIGQKLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELS
WGVYTKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFF
IVLELLVCAIHPIPGQYVFTWTARLAFTYTPSVADADVDIILSIPMFMRLYLIGRVMLLH
SKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYH
DKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARK
LELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKYTKLVKKIDHARVRKHQRKFL
QAIHQAQKLRSVKMEQRKLNDQANSLVDLAKTQNVMYDLVSELQERSEDLDKRIGTMEDK
LDSITGSLQALPGLLSQAITQQQRDLLDGFAQRFRPASLGSERSWTPTRHRRSPSTAPHT
SSDSG
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtattggtgaaaactgccaatgaggctggccggctcgattctacaggggct
tttcacgatgaaggggttctggagcaataccacgcaggcgagcagcaggacggagctgta
gaggggatgcagcatcggcacccgggagctgtctttcagcaccaccctctcagccagcag
cccagcggcgtcaacagcagtgctagtcatccccagaaaccgccgagccaagagggctca
ggcgcttcggtgcagaaccgcatccctctcagcaactgtcctcctccgccgctgttcagg
cagggctccgccgccttcttgcaacagaaccaacaagaacctcccagctcgaaccctttc
acccagccaggtactatccctccttattacagattgccaccaccaccaccaccaccaaga
agaaaccacgtaaccgggcagcgagggcaaaatcaaaaccaagcctgctgcttttctgtc
caacccctttctctgcaacaaaatcgaggggccgctaccaccgccgccgcagccggtgtc
acttcacagcagaaggaacacttctatcagagccactgttacagcaactgcggttattcc
aggcaagcgagcccgaaccaacaccagaaccacctcccgcaactgtctacaacagcaaca
acaacaccgccgattctacagcatcagaattcgaatcggggggaccatttgcaaaacgcc
agcaattaccagcggcagcagcacccgagcagcagcgtctgccgcagaagagaaggaggg
ttaggggagcagaaccgtttgcagcagcaacctcagcatcacaatcagtccaacctacat
cagcacccctcctattgcctagcagctccacaagagcagaatctagagcagcagagcaag
gacagcggtccattggaggtaaagcggcagttctatttatttcagcagcagccccgagat
tggcagccaccgccacctctactgcagcagcgacaacagcggctagggagcagccagtat
aacaactactgcaccgacggatcagggggagaggatataaatctactactacagctgcaa
gagcaagaacagccacacttgttccagcaaccgcagcctccgcagcactgtgacaactac
agcaagaaaccattggagcggcactgctgccagtacccccaacaagacaaacagccgaat
agccaccgccaagaaccgagccgcccgctctttggaaacttgtccggcggcagcagcagc
agcagcggctgcagcgacaacgaacgcagcctgtcctactcctcaaacacctgcctgtgg
cggcagcagcaccaagaaggaaaccagatcccaactgagcaacagcaggtaaatgctgag
cccaagaagctaagccatgctggatccaagccctccgtctgcgacagtagtaacccactc
cccgagatagccatgaacagctgcaagtacaatgggggcgtggtgagacccctgggcagc
ctgggctcgtcgcggcgcaaccttgccgagctggactcggagacgcagcccctgcagacg
ctgcacagctccggcctggaggtggtggtctccaagggcaatggcgaggaccccggcaaa
gtgtccagtgacagcctgtcccacgacggagggggcgcgccgcagaagaagaacaaggac
atcgggcaaaagctgggccaccgcagggcgctgttcgagaagcgcaaacggctcagcgac
tatgctttgatcttcgggatgtttgggatcgtcgtcatggtgaccgagacggaactttcc
tggggggtgtacaccaaggaatcctcatattcatttgcactgaaatgccttatcagcctt
tccactgttatattgcttggtctcattataatgtaccacgcccgagagatccagctcttc
atggtggacaatggagcggacgactggagaatagccatgacgtacgagcggatatttttc
atcgttctggagcttctggtgtgcgccatccacccaatcccggggcagtacgtcttcacg
tggacagcgcgcctggccttcacctacacgccctcggtggctgacgcagatgtggacatt
atactctccatccccatgttcatgcgcctctacctgatcgggcgagtcatgctgctgcac
agcaagctcttcaccgacgcctcgtcgcggagcatcggcgcgctgaacaagatcaacttc
aacacgcgcttcgtcatgaagaccctcatgaccatctgccccgggaccgtgctgctggtg
ttcagcatctcctcctggatcatcgctgcctggaccgtgcgcgtctgcgagaggtatcat
gacaaacaggaagtgactagtaacttcctgggagccatgtggctaatttcaataaccttc
ctctcgattggctacggagacatggtgcctcacacttactgcgggaagggtgtctgtctg
ctgacagggatcatgggggccggctgcacagcgctggtggttgccgtggttgccaggaag
ctggagttgaccaaggccgagaaacacgtccacaacttcatgatggacacgcagctctgc
aagcgggtaaaaaacacggctgcaaatgtactcagggaaacgtggctcatctacaaatac
acgaaactggtgaagaagattgaccacgccagggtgcgcaaacaccagcgcaagttcctg
caagctatccaccaagctcagaaactgcgcagtgtcaaaatggaacagaggaagctgaac
gaccaggcaaacagtttggtggacttggcgaagacgcagaacgtgatgtacgacctggtg
tcggagctgcaggagcgcagcgaggacctggacaagcgcatcgggacgatggaggacaag
ctggactccatcacgggcagcctgcaggccctgcctggcctcctcagccaagccataaca
cagcagcagcgggatctcctagatggctttgcgcagcgcttcaggccggcttcgctgggg
tccgagaggtcctggacccccactaggcaccggcgctcgccctccaccgcgccacacacc
tcctccgacagcgggtaa
DBGET
integrated database retrieval system
