Polyodon spathula (Mississippi paddlefish): 121301016
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Entry
121301016 CDS
T07273
Name
(RefSeq) PH and SEC7 domain-containing protein 2-like isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121301016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121301016
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121301016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
R2K_2
EGF_Sp38_C
Motif
Other DBs
NCBI-GeneID:
121301016
NCBI-ProteinID:
XP_041086027
LinkDB
All DBs
Position
2:77651372..77768955
Genome browser
AA seq
1320 aa
AA seq
DB search
MDGHHQVKTSFLFIQLQSPTKASAQTRPANTVCAAGWEERLSPDISRNESATVCDSRKPA
AVCLNSNSSDCLCSGLDSDRGYRNLEKTLKFPMQSHLNSSGREMSQIAPPARSGTPVSHS
VPTDIVNCENTNYLHSAATTDRHETGIQSPGLSTEAEESENPLKHSNSLTSQSPTNRGYI
SKARSQPLSTTTKKDGIWWKVEVNKPTLVDAPIFYKSPESKTFTSAVIERSAQLTGLYKK
TGDTNPITTSPVSQQPCTIKRVSPSPRTVQTAETFVWVKSTSPHAQSVAKAKYEFLFGKV
EEATPSDSVSRGSYHLVPEEGSSAANSFSEYGPVDGTGDEPSEQPMALANETGNAHVLTI
LPNERQDVILDIKSEKPCRAAKAPPTMISFNGASGEQLDMANQVQPSADIDKSMETSSLK
KPADLLLKSRLISELNTEVLTKDTVSVCSATTKEKELCSSSGEVKRDSLKALSSQEKLEE
ILAQAELTSGPETVVPTEGELGEGVVKETKTETLAASAEDGQEFEEPVDESRKILAEIPG
IFTAFLDGAHVREKTPKKIMFVEHKIDASDCLKMCEDLLQQTSDMTLELETEKECSTIVL
EASGPMGSHEGEAWFESSTGSDVVLPASKLDMGEDEVFGRIPEVNVESPESEVTLDICQA
RTNDSEENPQLTTQGEEATDVFSSQFESILESHWSKGTLYSSMESLDALSSADESEMHFN
FNLPLTPMIQQRIKESSRLLESTLEAGQHEILSVSTDSRTGEGYLEVTSSYLEVRTGTPL
SNSKSDHILDTTSVGPVQNGVHEDVEDIKKDSDWLHNLLSDAGLKERFLEFDSEMGSTER
LKGSTDTLGNSNRCDVEAARRLAKRLYNLEGFKRSDVAKHLGKNNDFSKLVAEQYLSFFD
FTGMTLDQSLRRFLKAFALMGETQERERVLIQYSNRYYHCNPGSVSSQDGVHCLTCALML
LNTDLHGHNIGKKMTCQEFITNLDGLNGGQDFPRDLLKALYNSIKNEKLEWAIDDDELKK
SLSELADKSDNAHLKGISRIGSGSNPFIDISHDPNAAVYKSGFLARKIHADMDGKKTPRG
KRGWKTFYAVLKGMILYLQKDEYKPENALSEDDLKNAISIHHAMAIKAMDYEKKPNVLKL
KTADWRVFLFQAQTPEEMESWIRKINSVAAMFSAPSFPSAIGSQKKFSRPLLPATTTRMS
QEEQLKSHEAKLKHITTELAEHRSYPPDKKVKTKEIEEYRLKEHYLEFEENRYEMYVKLL
KEGVKQVLGSKESDSSGLKKSQSSPSLNQELSPASAKVKRNVSERKDYRPETPSSKEKVT
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggatggtcatcatcaggtcaagacttccttcctctttatccaactgcagtcaccaacc
aaggcatctgctcaaacacgtcctgccaacacagtctgcgcagctggctgggaggaaagg
ctttccccagacatctcaagaaatgagtcagccactgtgtgtgactccagaaagccagca
gccgtctgcctgaacagcaacagctcagactgtctctgcagtgggctggacagcgaccgc
ggttacaggaacctggagaaaacattgaagtttcccatgcagtcacaccttaacagcagt
ggcagagaaatgagccaaatagctcctccggctaggagtgggactccagtttcccattca
gtacctactgatatagtgaactgcgaaaacacaaactacctacattcagcagcgactaca
gacagacacgagactggaattcaaagtcctggactgagcacagaggctgaagaaagtgag
aatcccttgaagcattcaaactccttgaccagtcagtctccaacaaacaggggctacatc
tccaaagcaagaagtcaaccactctccaccaccacaaaaaaggatggaatctggtggaaa
gtggaagtcaataagccaacgctggtggatgcaccaattttctacaaaagccccgaaagc
aaaacatttacatctgctgtcatagaaaggtcagcccaattaactggactatataaaaaa
acaggagatactaaccctatcaccacctcacctgtctcacaacagccgtgcacaataaag
agggtttcacccagccctaggacagttcaaacggcagaaacatttgtttgggtcaaaagc
acgtcaccacatgcacaaagtgtggcaaaggccaaatatgagtttctatttggaaaagta
gaggaggctaccccatcagacagcgtttcaagaggaagctaccaccttgtacctgaggag
ggcagcagtgctgctaattcattctctgagtatggcccagttgacgggactggagatgag
ccatctgaacagccgatggctttggctaatgagacaggaaatgcacatgtactaactatt
ctgccaaatgagcggcaagatgttattttggatataaaatcagaaaaaccatgcagggct
gccaaagcacccccaacgatgatatcctttaatggggctagtggtgagcagttggacatg
gctaatcaggttcagccgtcagctgacatagataaaagtatggaaacttctagtctgaaa
aaacctgctgatctgcttttgaaatcaagactgatttctgaactaaatactgaggtactg
accaaggatacagtttctgtctgttctgctacgactaaggaaaaagagctttgttcctca
agtggagaggtgaaaagagacagtttaaaagctctctcaagccaagaaaaactagaagaa
atacttgctcaagctgaattaacatctggaccggagactgtggtacccacagaaggagag
ctgggtgaaggagttgttaaagaaacgaaaactgagacactggctgcttctgctgaagac
ggacaagaattcgaggagccagtggatgaatctcgtaaaatacttgctgaaattccagga
atcttcactgccttcttggatggagcgcacgtcagagaaaaaacacctaaaaaaataatg
tttgtggaacataaaatagatgcttcagattgtctaaagatgtgcgaggaccttttacag
caaacctcagatatgactttagagcttgaaactgaaaaggagtgctccaccattgtcctg
gaggcgagtggaccaatggggagtcatgaaggtgaagcgtggtttgagagtagcacaggt
tcagatgttgtgcttcctgcttctaaactggacatgggagaagatgaggtgtttgggagg
attccagaagtaaatgttgagagcccagagagtgaagtgacacttgacatatgccaagcc
aggaccaatgatagtgaagagaacccacagctgacaacgcagggtgaggaagcaactgat
gtgtttagttcgcagtttgaaagcattttggaatcgcattggtcaaagggcactttgtac
agcagcatggaatccctggatgccctctcttctgctgatgagtccgaaatgcacttcaat
ttcaacttgcccctcacaccgatgatccagcagcgcatcaaagagagcagccgtctcctg
gagagcactctggaggcagggcagcatgagatcctgagtgtgtctacagacagtagaaca
ggagaagggtatttggaggtaacatcatcatacctggaggtcaggactgggactccactt
agtaacagcaaatctgaccacattttagatactacttctgtgggccctgttcaaaatgga
gttcatgaggatgttgaagacatcaagaaagattctgactggctgcataaccttttaagt
gatgctggactgaaggaaaggtttttggaatttgactctgagatgggcagcactgagcga
ctgaaaggcagcactgacactctcggcaatagcaacaggtgcgacgtggaggcagcgagg
agactggctaagcggctgtacaacttggaggggttcaagcgctcggatgtagctaagcac
ttgggaaaaaacaatgacttcagcaagcttgtagctgaacagtacctctcattttttgac
ttcactggaatgacattggaccaatctcttagacgcttcttgaaagcatttgcactaatg
ggtgaaacccaggagagagagcgggttttaatccagtattccaatagatactatcattgt
aaccctggctcagtttcttcacaagatggagttcattgccttacttgtgctttgatgctg
ctaaatactgaccttcatggccataatattggaaagaagatgacgtgccaggagttcatc
accaacctggatgggctgaatggagggcaggatttccccagagacctccttaaggccctc
tacaattcaatcaaaaatgaaaagctggaatgggctatagatgatgatgagctgaagaaa
tctctgtctgagcttgcagacaaatctgataatgcacacttaaaaggcatcagtagaatt
ggcagtggcagtaaccctttcattgatatttcccatgatccaaatgctgcagtttataaa
tcgggctttcttgcccgtaaaatccatgcagacatggatggaaagaaaactcctcgaggc
aaaagagggtggaagaccttttatgctgtcctcaagggaatgatcctttatttgcaaaag
gatgaatataaaccagagaatgcattgtcagaagacgatttgaaaaatgcaatcagcata
catcatgctatggctataaaggcaatggactatgagaagaaacccaatgtcttgaagctt
aaaacagctgattggagagtcttccttttccaagctcagactcctgaagaaatggaatct
tggataagaaaaatcaattcagtggcagccatgttttccgcgccatcatttccttctgcg
attggctcacagaagaagttcagccgtcctcttttacctgcaactacaacaaggatgtca
caagaagaacagctaaaatctcatgaggccaagctgaagcacatcaccactgaactggct
gaacaccgatcctacccacctgataaaaaggtcaaaacaaaggagattgaggagtacaga
ctcaaagagcactatctggagtttgaggagaaccgctatgagatgtatgttaaacttctg
aaggagggagtaaaacaggtacttggcagtaaagaaagtgacagcagtggactgaagaaa
tcccagtcaagtccatcgctaaaccaggagttatcaccagccagcgcaaaggtcaagcgc
aatgtctcagaaaggaaggactaccggcctgaaacacccagctctaaggaaaaggtcacc
tag
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