KEGG   Polyodon spathula (Mississippi paddlefish): 121301041
Entry
121301041         CDS       T07273                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144  Endocytosis
pspa04517  IgSF CAM signaling
pspa04519  Cadherin signaling
pspa04530  Tight junction
pspa04810  Regulation of actin cytoskeleton
pspa05100  Bacterial invasion of epithelial cells
pspa05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    121301041
   04519 Cadherin signaling
    121301041
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121301041
  09144 Cellular community - eukaryotes
   04530 Tight junction
    121301041
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    121301041
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121301041
   05100 Bacterial invasion of epithelial cells
    121301041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pspa04131]
    121301041
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pspa04812]
    121301041
Membrane trafficking [BR:pspa04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    121301041
Cytoskeleton proteins [BR:pspa04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     121301041
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st WD40_Gbeta RMC1_N Beta-prop_TEP1_2nd EIF3I Rax2 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_SPT8 DUF7711
Other DBs
NCBI-GeneID: 121301041
NCBI-ProteinID: XP_041086062
LinkDB
Position
26:complement(14417686..14422183)
AA seq 370 aa
MSLHQFLLEPITCHSWNHDRTQVAISPNNHEVHIYRKSGNQWVKAHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPSENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
AATPWGSKMPFGQVMAEFGGAGSGGWVHSVSFSVSGNRLAWVSHDSTVSVVDAPKSMMVS
HLKTEYLPLLSVIFISENSVVAAGHDCCPMLYNYDDRGTLTFISKLDIPKQSIQRNISAM
ERFRNMDKRATTEDRNSNLETLHQNSITQVSIYEGDKRDCWKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgtccctgcatcagtttctattggaaccaatcacctgtcattcctggaaccatgaccga
actcaggttgccattagccccaataaccacgaggtccatatctataggaagagtgggaac
cagtgggtcaaagctcatgagcttaaggagcacaacgggcacattacaggcattgactgg
gccccaaaaagtgaccgcattgtaacttgcggcgcagaccgcaatgcttatgtctggagc
cagaaggacggggtctggaaacccactctggtgatcctgaggattaaccgtgctgccact
tttgtaaagtggtcaccctctgagaataagtttgcagtgggcagtggagctcgacttatc
tctgtctgctactttgagtctgaaaatgactggtgggtcagcaaacacatcaagaagccg
attcgctccactgtcctgagcttagactggcatccaaacaacgtcctgctagctgcaggg
tcatgtgacttcaaatgcagagtcttttctgcatacatcaaggaagtggacgagaaacca
gctgccactccctggggttctaagatgccctttggtcaggtgatggcagagtttggtggc
gctggcagtggaggatgggtacacagcgtcagtttctccgtcagcggaaaccgccttgct
tgggtcagccacgacagtactgtgtcggtcgtagatgctcctaaaagcatgatggtctcc
cacctaaagactgaataccttcctcttctgagtgtgatattcatctcagagaacagtgtt
gtagcagctggtcatgactgctgcccaatgttgtacaattatgatgaccgtggcaccctg
accttcatctctaaattagacattccgaagcagagcatccagcgcaacatctctgccatg
gagcgcttccgcaacatggacaagagagccactaccgaggaccgcaactcgaacctggag
acactgcaccaaaacagcatcacccaagtgtctatatatgaaggcgataaaagagattgt
tggaaattctgcactactggaattgatggagccatgaccatatgggatttcaagacgctg
gagtcttctatccagggccttcggatcatgtga

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