Polyodon spathula (Mississippi paddlefish): 121301041
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Entry
121301041 CDS
T07273
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
pspa04530
Tight junction
pspa04810
Regulation of actin cytoskeleton
pspa05100
Bacterial invasion of epithelial cells
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121301041
09144 Cellular community - eukaryotes
04530 Tight junction
121301041
09142 Cell motility
04810 Regulation of actin cytoskeleton
121301041
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121301041
05100 Bacterial invasion of epithelial cells
121301041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121301041
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121301041
Membrane trafficking [BR:
pspa04131
]
Others
Actin-binding proteins
Arp2/3 complex
121301041
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
121301041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_EML
RMC1_N
Beta-prop_TEP1_2nd
EIF3I
Rax2
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
121301041
NCBI-ProteinID:
XP_041086062
LinkDB
All DBs
Position
26:complement(14417686..14422183)
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AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHSWNHDRTQVAISPNNHEVHIYRKSGNQWVKAHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPSENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
AATPWGSKMPFGQVMAEFGGAGSGGWVHSVSFSVSGNRLAWVSHDSTVSVVDAPKSMMVS
HLKTEYLPLLSVIFISENSVVAAGHDCCPMLYNYDDRGTLTFISKLDIPKQSIQRNISAM
ERFRNMDKRATTEDRNSNLETLHQNSITQVSIYEGDKRDCWKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcatcagtttctattggaaccaatcacctgtcattcctggaaccatgaccga
actcaggttgccattagccccaataaccacgaggtccatatctataggaagagtgggaac
cagtgggtcaaagctcatgagcttaaggagcacaacgggcacattacaggcattgactgg
gccccaaaaagtgaccgcattgtaacttgcggcgcagaccgcaatgcttatgtctggagc
cagaaggacggggtctggaaacccactctggtgatcctgaggattaaccgtgctgccact
tttgtaaagtggtcaccctctgagaataagtttgcagtgggcagtggagctcgacttatc
tctgtctgctactttgagtctgaaaatgactggtgggtcagcaaacacatcaagaagccg
attcgctccactgtcctgagcttagactggcatccaaacaacgtcctgctagctgcaggg
tcatgtgacttcaaatgcagagtcttttctgcatacatcaaggaagtggacgagaaacca
gctgccactccctggggttctaagatgccctttggtcaggtgatggcagagtttggtggc
gctggcagtggaggatgggtacacagcgtcagtttctccgtcagcggaaaccgccttgct
tgggtcagccacgacagtactgtgtcggtcgtagatgctcctaaaagcatgatggtctcc
cacctaaagactgaataccttcctcttctgagtgtgatattcatctcagagaacagtgtt
gtagcagctggtcatgactgctgcccaatgttgtacaattatgatgaccgtggcaccctg
accttcatctctaaattagacattccgaagcagagcatccagcgcaacatctctgccatg
gagcgcttccgcaacatggacaagagagccactaccgaggaccgcaactcgaacctggag
acactgcaccaaaacagcatcacccaagtgtctatatatgaaggcgataaaagagattgt
tggaaattctgcactactggaattgatggagccatgaccatatgggatttcaagacgctg
gagtcttctatccagggccttcggatcatgtga
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