Polyodon spathula (Mississippi paddlefish): 121301048
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Entry
121301048 CDS
T07273
Name
(RefSeq) CUGBP Elav-like family member 5 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121301048
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121301048
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
121301048
NCBI-ProteinID:
XP_041086070
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Position
26:complement(20585350..20639382)
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AA seq
514 aa
AA seq
DB search
MMARFTETETRREQHHRLAHGSLVLAAPAPNQYPPPQLALPKPMNGSEPISIHPDSGSSM
KDQDAIKLFIGQIPRNLEEKDLMPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESA
IKAQNALHEQKTLPGMTRPIKVKPADSESRGEDRKLFVGMLSKQQSEEDVYRLFQPYGVI
EECTVLRGPDGNSKGCAFVKYSTHAEAQAAISALHGSQTMPPSSPSLPLQGASSSLVVKF
ADTDKERTIRRMQQMVGQFGIFNPAVALPFATYSTYAHALMQQQAALMAASHGGYLAPSV
AFPAAQIHQMGALTLNGLPAAPMTPVSGLSSPPSIAPSAVPSIVTPLVNGFTGLHHQPNG
HPAVEAVYTNGLPAYSAQSPSAADTLQQAFTGVQQYTAIYPAATLTPIGQPVPQPPPLIQ
QQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGAVISSKVFMDRATNQSKCFGFVSFDNP
ASAQAAIQTMNGFQIGMKRLKVQLKRPKDASRPY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgatggccagattcaccgagactgaaacgagacgagagcagcaccaccgtctagcgcac
ggcagcctcgtcctcgcagcgccagcgccgaaccagtacccgcctccacagctcgccctc
cccaaacccatgaacggctccgagcccatctccatacacccagacagcggcagcagcatg
aaggatcaggacgcgataaagctgtttatcgggcagattccgcggaacctcgaggagaag
gatctgatgccgctgttcgaacagttcgggaagatccacgagctaacggtgctgaaggac
cggtacacgggcatgcacaaaggctgtgccttcctcacatactgtgccagggagtctgca
atcaaagcacagaacgctctgcatgaacagaagacgctgcctgggatgacgcgtccgatc
aaggtgaagccagcggacagcgagagccgtggagaagacaggaagttgtttgtggggatg
ctgagcaagcagcagagtgaggaggatgtgtaccgcctcttccagccctacggagtcatc
gaggagtgcaccgtgctcaggggccctgacggaaacagcaaaggctgtgcgtttgtaaag
tactccacacacgccgaggcccaggcagcgatcagcgctctgcatgggagtcagaccatg
ccacccagctcgccttctctccccctccagggcgcctcctccagcctggtggtgaagttc
gccgacaccgataaggagcgcacgatccgcaggatgcagcagatggtcggccagtttggg
atcttcaaccccgccgtcgctctgccctttgccacgtacagcacctacgcacacgcattg
atgcagcagcaggctgctctcatggctgcctctcatggggggtacctggcccccagcgtt
gcgttcccggccgctcagatccaccagatgggggccctgaccctgaacgggctgccggcc
gcgcccatgacgccagtgtcgggtctcagctctcccccctccatcgccccctcagcagtt
cccagcatcgtgacccccctcgtgaatggcttcaccgggctccatcaccagcccaacggg
caccctgccgtggaggctgtctacaccaacggcttgccagcatactcagctcagagcccc
agtgcagcagacaccctccagcaagccttcacaggggtgcagcagtacacagcgatctac
ccagcggccactctgacccccattggacagcccgtcccccagcccccccctctcatccag
cagcagagagaagggcccgagggctgtaacctcttcatataccacctgccccaggagttc
ggagacaacgagctgatgcagatgttcctgcccttcggggcggtcatctcctccaaggta
ttcatggaccgagccaccaatcagagcaagtgcttcgggtttgtgagcttcgacaacccg
gccagcgctcaggctgccatccagaccatgaatggattccagatcggcatgaagaggttg
aaagtccagttgaaacggccgaaggatgccagccgcccgtactga
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