Polyodon spathula (Mississippi paddlefish): 121301064
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Entry
121301064 CDS
T07273
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121301064
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121301064
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121301064
Nuclear receptors [BR:
pspa03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
121301064
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Apo-CII
Motif
Other DBs
NCBI-GeneID:
121301064
NCBI-ProteinID:
XP_041086109
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All DBs
Position
26:complement(17124144..17137372)
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AA seq
450 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRSCLIDRTNRN
RCQHCRLQKCLSLGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQELAVPKEEPESHSRSY
SNSSSAGLSDLDDISALPDGLLFDLPLTPEGAGQYSAELLDLAQSSPEQCSTELSDARHI
KQEYQPSLFSPLPEGTSMQEIERVSQNIVKSHLETCRYTAEELKRLTWTLYTQEEIRTLQ
SKSTEAMWQHCTHQLTNAIQYVVEFAKRITGFMDLCQNDQIILLKAGCLEVLLIRSCHAF
NPVNNTLLFDSKYAGTPVFKSLGCDDLINAVFELAKGLSRLQLTEEEMALFSAAVLLSPD
RPWLTDTQKVQRLQERVYLALQSCLQRRPASKEKLTKMVSKLPLMKSICNLHMDKLEFFS
LVHPDTAYSFPPLYREVFGSEVQYPDSSER
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatcgaagtgatcccgtgtaaaatctgcggggacaagtcctcaggaata
cattacggcgtcatcacctgcgagggctgcaagggttttttccggcgcagtcagcaaaac
aacgccatgtactcctgctctcgccagcgcagctgcctgatcgaccgcaccaaccgaaac
cgctgccagcactgccgcctgcagaagtgcctgtcgctgggcatgtcgcgggacgcggtg
aagttcggtcgcatgtccaagaaacagcgggacagcctgtacgcggaggtccagaagcac
cagcagagccaggagttggccgtccccaaggaggagcccgagagccacagcaggtcctac
agcaacagctccagcgcggggctgagcgacctcgatgacatcagcgccctgccggatggg
ttgctcttcgacctcccgctgacccccgagggggctggccaatacagcgcagagctgctg
gacttggcacagtcctcccctgagcagtgcagcacggagctctcggacgccagacacatc
aagcaggagtaccagcccagcctcttctctcccctgccagagggcacctccatgcaggag
atcgagcgggtctcacagaacattgtcaagtctcacttggagacgtgtcggtacacagca
gaggagctgaagagactcacctggactctgtacacgcaagaggagatccggaccctgcag
agcaagtccacagaagcgatgtggcagcattgcactcaccaactcaccaatgccatccag
tacgtcgtggagtttgccaaacgcatcaccggcttcatggacctctgccagaacgaccag
atcattctgctcaaagcagggtgcctggaggtgctgctgattcgctcgtgccacgccttc
aaccccgtcaacaacacgctgctcttcgatagcaagtacgcagggactccagtcttcaaa
tccctcggctgcgatgacctcatcaacgccgtgttcgagctggcgaaggggctgagccgc
ctgcagctgacggaggaggagatggctctgttcagtgccgccgtgctgctgtcacctgac
cggccctggctgacggacactcagaaggtacagaggctgcaggagcgcgtctacctagcc
ctgcagagctgcctgcagaggagacctgccagcaaggagaaactcaccaagatggtctcc
aagctgcctctgatgaagtcaatctgcaacctgcacatggacaagctggagttcttcagc
ctcgtgcaccccgacacggcctacagcttcccccccttgtaccgcgaggtcttcggcagc
gaggtgcagtacccagattccagcgagcgctaa
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