Polyodon spathula (Mississippi paddlefish): 121301067
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Entry
121301067 CDS
T07273
Name
(RefSeq) semaphorin-6B-like
KO
K06842
semaphorin 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Squash
Motif
Other DBs
NCBI-GeneID:
121301067
NCBI-ProteinID:
XP_041086114
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Position
26:complement(20829503..20878214)
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AA seq
883 aa
AA seq
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MTTQAPPLLLLTLLLRLANSAFPEQTQPLSTVPVGAVRQYPVFVGRSQGSVLRQEPLHIQ
RILQVNRTLYIGARDDLYRVDLDVLVGEEMFYSRKHTWKSNQNDIRVCRMKGKHEDECRN
FMKVLLSRRDGTLFVCGTNAFNPLCANYSTDSLELLGDTISGMARCPYDPKHANVALFAG
GNLFTATVTDFLAIDAVIYRSLGDGPALRTVKHDSKWFREPYFVSSVEWRGHVYFFFREM
AMEFNYLEKVLVSRVARVCKSDLGGSQRVLEKQWTSFLKARLNCSVPGDSLFYFNVLHST
TGVLQLDGRDVVLGVFSTPSNSIPGSAVCAFDMEQLDRVFQGRFKEQKSPESIWTPVPDE
AVPRPRPGGCALPGSRFNSSSSFPDEMLTFVKTHPLMDEAVPSLGPQPWIIRTMVRYHLT
KIVADIEAGPYRNHTVLFLGSDSGSVLKFLIKPKSESNPANSSLFLEEFEGYNPDKCGGD
GPESRSMLAMSLDRPSRSLLLAFPSCVVRVPLARCQQHSLCMKSCISTQDPYCGWTKGST
CSFLEPGTRLPFEQDIAHGNTSYLGDCHGLLQESFMEQRDGLVSVNLLVVSAVSAFAMGA
ALSGLAVCWFMGHQQRHCARSGAGGSGAVRRKGEKEQSMGGSVVSVTRPSGGQSETLLAP
LMMPNGWPKVMGVAVGGVPDLDSGGLLPTPEQTPLQQKRCPPGLRLTGGDPSWEQSHYLN
AGPGPSSSSSSSSVIYLSSKHLPRESRHCVQGEQREPQHYLSLAVRERSDRHSPALRNSS
GGHPYPVTPQDSPDRRRVVSAPNTQLDFGEHLRWNPESLSFNSNNGSSSQSSRHYSKPPP
PHSGDHAFHGLLRSSHQPHPPALNGLAVQGREQADSIWPMRNK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcaagccccacccctgctcctgctcaccctgctactccgattggccaactct
gctttccctgaacaaacacagccactgagcacagtccctgtgggagctgtcagacagtac
cctgtgtttgtgggtcgatcgcagggctcggttctgaggcaggagcccctccatatccag
aggattctgcaggtgaaccgcactctctacatcggagccagagatgatctgtaccgtgtg
gatctggatgtgttggtgggggaggagatgttttacagcaggaagcacacctggaaatcg
aaccagaatgacatcagagtctgcaggatgaaaggcaaacatgaggacgagtgtcggaac
ttcatgaaggttctgctgagccggagggacggcacactgtttgtgtgcggaaccaacgcc
tttaaccctctgtgtgccaactactccacggactctctggagcttcttggggacacgatc
agcgggatggcgcgctgcccctacgacccgaaacatgccaacgttgccctcttcgcaggt
ggaaacctgttcacggcgacagtgacagacttcctggcgattgacgctgttatttaccgg
agcctgggggacggtccagctctgcgcaccgtcaagcacgactccaagtggttcagagag
ccctattttgtcagctctgtggaatggaggggccacgtctacttcttcttcagggagatg
gcaatggagttcaactacctggaaaaggtcctggtgtctcgcgtggcccgtgtgtgtaag
agtgatctggggggctctcagagagtgctggagaagcaatggacctccttcctcaaggct
cggctcaactgctcggtcccgggagactctctcttctacttcaacgtgctgcactccacc
actggggtcctgcagctggacgggagagacgtggtgctgggggtcttctcaacaccgtcc
aacagtatccccggctctgccgtgtgtgcgttcgatatggagcagctggacagggtgttc
caggggcgtttcaaggagcagaaatctcctgaatccatctggaccccggtgccagacgag
gctgtgcccagacccagacccggaggctgtgcacttccaggctccaggttcaactcctcc
agcagcttccctgacgagatgctgaccttcgtgaagacgcaccccctgatggacgaggcc
gtcccctcgctggggccccagccctggatcatcaggaccatggtcaggtaccacctcacc
aagattgtggcggacatagaggccggcccctacagaaaccacacggtcctcttcctgggc
tcagactcggggagcgtcctgaaattcctcatcaaacccaaaagtgaaagcaaccctgcc
aacagcagcctcttcttggaggagttcgaaggatacaatcctgacaagtgcggtggagat
ggccccgagtccaggagcatgttagccatgtctcttgacaggcccagccgctctctcctg
ctggccttcccctcctgtgtggtccgggtccccctcgctcgctgccagcagcactccctg
tgcatgaagagctgcatctccactcaggacccgtactgcggctggaccaagggcagcacc
tgctccttccttgaacctgggaccaggctcccgttcgagcaggacatcgctcacggaaac
acctcctacctcggggactgtcacggcctcctgcaggagagcttcatggagcagcgggac
ggcctggtctctgtgaacctgctcgtggtctctgcggtctctgccttcgcgatgggggcg
gcgctgtcgggcctggcggtctgctggttcatgggtcaccagcagcgacactgtgcccgc
agcggggcgggcggctcgggggccgtccggcgcaaaggggaaaaggagcagagcatgggg
ggctcagtggtgagcgtgacccggcccagcgggggccagtccgagaccctgctggccccc
ctgatgatgccaaacggctggcccaaggtcatgggggtggcggtggggggcgtgccggac
ctcgattcggggggtctcctacccactccggagcagacccctctgcagcagaaacgctgc
cccccgggtctccggctgaccggaggggaccccagctgggaacagagtcactacctgaac
gcaggccccggcccttcctcctcctcctcctcctcctccgtcatctacctgagctccaag
cacctgcctagggagagccggcactgcgtgcagggggagcagagagagccccagcactac
ctctccctggcagtgagggagcgctccgacaggcacagcccggctctcaggaactcctcc
ggggggcacccctaccccgtcaccccgcaggacagcccagacagaaggagggtggtctca
gccccgaacacccagctggatttcggagaacacctgcgctggaatccagagagcctcagc
ttcaacagcaacaatgggtcgtcttcccagagcagccgtcattacagcaagcccccaccc
ccccacagcggtgaccacgccttccacggcctgctgaggtcatcacaccagccacaccca
cccgccctgaacggccttgctgtgcaagggagggaacaagcggactccatctggccaatg
agaaacaagtaa
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