Polyodon spathula (Mississippi paddlefish): 121301070
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Entry
121301070 CDS
T07273
Name
(RefSeq) retinal homeobox protein Rx1-like
KO
K09332
retina and anterior neural fold homeobox protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121301070
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121301070
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Cytadhesin_P30
Motif
Other DBs
NCBI-GeneID:
121301070
NCBI-ProteinID:
XP_041086118
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Position
26:complement(18003109..18006273)
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AA seq
328 aa
AA seq
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MHLSLDSMSMVDDSCLSPGNFHEMVKGGGVALGGRVHSIDVILGFSKDHDPLLNPGGPGT
HKSGMESLGDLGKPDPTNPYGHLSSLRDHSDHAAFHDSGLFSEKCEGELSELRKGVESDG
KSPELLEEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAAKVNLPEVRV
QVWFQNRRAKWRRQEKMDASTMKLHDSPMLSFNRPPMSANMGPTSNSLPLDPWLTSPLSS
ATPVHSIPGFMGPPQGMQPGYPSHPYLNTPPSMAQGMQQMAPPPYQCSTTFVDKYPLEDV
DQRSSSIAALRMKAKEHIQSMDKTWLPI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtcgctggattccatgagcatggtggatgacagctgtctctcgcctggaaac
tttcacgagatggtgaagggtggaggagtggcattgggagggcgtgtccacagtattgat
gtcatcctgggcttcagcaaggaccacgaccccctcctgaaccctgggggcccggggacc
cacaaatcgggcatggaaagtctgggcgacctggggaaaccagaccccaccaacccctac
ggacacctctcctccctcagggaccactctgatcatgcagccttccatgactccggcctg
ttttccgaaaagtgcgagggggagctgagcgagctgcggaagggcgtggagagcgacggg
aagtctcccgagctgctggaggaggaggagcagcccaagaagaagcaccggcgcaaccgc
accaccttcaccacgtaccagctgcacgagctggagcgcgccttcgagaagtcacactac
cccgacgtgtacagccgcgaggagctcgctgccaaggtcaacctgcccgaggtccgcgtc
caggtgtggttccagaatcgccgtgccaagtggcgtcggcaggagaagatggacgccagc
accatgaagctgcatgactcacccatgctgtccttcaaccggccacccatgtccgccaac
atgggccccacaagcaactccctgcctctggacccctggctcacctcgcccctgtccagc
gccaccccagtgcacagcatccctgggttcatgggccccccgcagggcatgcagccgggg
taccccagccacccctacctcaacacccccccatccatggcgcagggcatgcaacagatg
gcacccccaccctaccagtgctccaccaccttcgtggacaagtatccactggaggacgtg
gaccagcgcagctccagtatcgctgccctgcggatgaaagccaaggaacacattcagtcc
atggacaaaacctggctgcccatctga
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