Polyodon spathula (Mississippi paddlefish): 121301090
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Entry
121301090 CDS
T07273
Symbol
si:dkeyp-72e1.9
Name
(RefSeq) syntaxin-binding protein 4 isoform X1
KO
K15302
syntaxin-binding protein 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121301090 (si:dkeyp-72e1.9)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121301090 (si:dkeyp-72e1.9)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
DUF7792
CCDC39
KIF21A_4th
UPF0242
CCDC113_CCDC96_CC
DUF4407
Motif
Other DBs
NCBI-GeneID:
121301090
NCBI-ProteinID:
XP_041086144
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Position
26:complement(16209396..16240730)
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AA seq
741 aa
AA seq
DB search
MTVEGIQGDRTECAMAAYHNTVTPSLSQRTLMGPYGADRIVHSIDFTDCENGLGIKVIGG
VKELTGEEHGVFVKRILPGGLASSDGHLQPGDQILEVNGESLIGVTSDRAVDILRSASAS
NHMRLFIARDDEARREFAELLEKSGSSSSTGSARSSPSQHSGSRYLDSTSSGSSSRSQSP
LLLSPAGCHSAYNGSSGPLLRSFSHPGEGLIQLISIPRASGFGIAIGGGLNRPDGPAVFI
QDILSGGDCHRDGRLRPGDQLIAINKESLIGVTHEEAKCTLNKAKFRQEGTVEIAFIPGQ
RPFPGSSSVPTGVQLCAGGGHGVGRLKVHVRSPEVRTHPHLPCTHEPRERQTRQEELLPV
PLPSASSDICPPELTASGTSTSLNSSTASETKQKVSLDPYVRLKSEKLDLALRYLGLDVP
EQKRRKLLQSLTVDPQGTVAYGDFVEAARDVLHEKLEEAGLGSGPFMFSYHEAASLMDTS
AFHSPTCDSVSGNNTEELEHFQSEATLLQQQVKQLQTLLRDAQNSKKTLEEELQKSNQTA
SALFAENKTLRSKLQVAEVVQRQTQSAEQDYEEVIQLLEAEIRDLKTQLEGTKHTKGSEA
TKEDVLELKRRLSAVDCQLRKSELTRKHLEISNLKLLVFAQNVHRVLTSSSLLTPENGLR
KQLPDSKAGGTVDPQLPDSKAEGTVDPKGLWVAEVKELVECACSLSTGHTLLNGWEECST
PEETKYFADAHGKCWIDNNGD
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggaagggatacaaggagacaggacagaatgtgcaatggcagcatatcacaac
actgttacaccttcactgagccaaaggactctcatgggtccatacggtgcagaccgcatt
gtacattccatagacttcacagactgtgagaatggactgggaattaaagttattggagga
gtaaaggaattaactggcgaggaacacggggtgtttgtcaaaagaatcctacctggtggc
cttgcttcgagtgacggacatcttcagcctggggaccagatcttagaagtgaatggggaa
agtttaataggagtaacaagcgacagggcagtggacatcctcagatcagcgtctgcttcc
aatcacatgcgccttttcatagcaagagatgatgaggctaggagggagtttgctgaactg
cttgagaagtccggctccagcagcagtacaggctctgcaaggagctcccctagccaacac
agcggcagcagatatttagatagcacctcatcggggtcctcgtcgcgctcccagagtcct
ctgctgctgagtccggctggctgtcatagtgcttataatggaagctctggacccttactg
cgctcattcagtcaccctggtgaaggcctgattcagctcatctccatcccgagggcttca
ggatttggcattgccatcggcggcggcttgaaccggcctgacggaccagcagtgttcata
caggatatcctctccgggggggactgccacagggatggcagactcagacccggagaccag
ttaattgcgatcaataaggagtcgttgataggtgtgacacatgaggaggccaagtgtacc
cttaacaaagccaagttcaggcaggaaggcacggtggagatcgcgttcattcctggacag
aggccctttccggggagcagctcggtgcccaccggagtgcagctctgtgcggggggtggg
catggcgtgggcaggttaaaagtgcacgtgaggtcccctgaggtacgcacacacccacac
ttaccctgtactcacgagcccagagagagacagacaagacaggaagagctattgccagtg
cctttgccctcagcatcctccgatatctgccctccagagctcacagcgtcaggaacctcc
acatcgctgaattccagcacagcctctgaaactaaacaaaaagtgtcactggacccgtat
gtcaggctcaagtcagagaaacttgacttggcactgaggtacctggggctggatgtccct
gaacagaagaggagaaagttgcttcagagcctcaccgtggatccacaaggaactgtagcc
tatggcgatttcgtggaggcagcccgggatgttctgcatgagaagctggaggaagcaggt
ctggggtcaggccctttcatgttttcttatcacgaggcagccagcttaatggatacatct
gcattccattcccctacatgtgactctgtgagtgggaacaacacggaggagctggagcac
ttccagtctgaggcaacgcttctgcagcagcaggtgaaacagttacagactctactaaga
gacgcacagaacagcaagaagaccctggaggaggagctgcagaaaagcaatcagacagcg
tctgccttgttcgcggagaataagaccctgagaagcaagctgcaggtggccgaggtggtg
cagcggcagacccaaagtgcagagcaggattatgaggaggtgatccagcttctggaggct
gagatcagagatctgaaaacccagctggaagggacaaaacacaccaagggcagcgaagct
accaaagaagatgtgcttgaactcaaaagaagactttctgccgttgactgccagctccgg
aaatctgagctcacgaggaaacatctagagatctccaacttgaagctgctggtatttgct
cagaatgtccacagggtcctgacatcctccagtctattaacaccagaaaacgggctgagg
aagcagttaccagactcgaaggcagggggcactgttgacccgcagttaccagactcgaag
gcagagggcactgttgacccaaaaggcctatgggttgcagaggtgaaggagttggtggag
tgtgcctgctccctcagcactggccacacgttgctgaatggctgggaggagtgcagcacc
ccagaagagaccaagtactttgctgatgctcacggaaagtgctggattgacaacaatgga
gactga
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