Polyodon spathula (Mississippi paddlefish): 121301125
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Entry
121301125 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF1-like
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121301125
03036 Chromosome and associated proteins [BR:
pspa03036
]
121301125
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121301125
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121301125
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
121301125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_10
Rad60-SLD
PHD_2
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
121301125
NCBI-ProteinID:
XP_041086181
LinkDB
All DBs
Position
27:5168484..5177697
Genome browser
AA seq
789 aa
AA seq
DB search
MWIQVRTMDGKETHRIDSLSKLTKVDDLRLKIAELFKVEPQRQRLFYRGKQMEDSHTIFD
YNVGLNDIVQLLVRQAVPNCLPAVPKEAELSDTDSGCGSAQSESDKNSNNGEEVEGQAGT
SAQSDPVEPAFGCYKINEFVDACDLNMGAWFEAQILNVTKEPKSSSESGEDKTDSAKPSK
EETVVMYHVKYEDYPENGVVKLTGKDVRPRARTVYQWHQLEVGMVVMVNFNPDEPKERGF
WYDAEIQRKRETRTAREIYGKILLGDAGDSLNDCKIMFVNEIYKIEEPGSAEGAALESPM
KRSNGPECKHCKDDPKKNCRMCNCHVCGVKQDPDKQLLCDECDQAFHMYCLDPPLTSIPD
DEDWYCPNCRNDASEVVLAGEKLKESKKKSKMASANSSTQRDWGKGMACVGRTKQCTIVP
SNHYGPIPGVPVGTQWKFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDAGN
EFTYTGSGGRDLSGNKRTAEQSCDQKLTNMNRALASNCNAALNDKDGAEAKDWKAGKPVR
VVRSSKGRKHSKYSPEDGNRYDGIYKIVKYWPEKGKSGFLVWRYLLKRHDDEPAPWTRDG
KERIKKLGLTMQYPEGYLEAQAAKEKEKENKKEDYDEEEEGEVETPSKGKRKRKSQIDKE
TSSPVKSTPKKMKVEAYKLTKEQKGLIKEDELNKKVWDEALTSLKEGPKFLNKVEEVFLC
ICCQEVVFQPVTTECQHNVCRECLQRSFKADVYTCPACRHDLGKNYSMTVNKPLQSLLSQ
FFPGYSSGR
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccaggtgcgtaccatggatgggaaggagacccaccggatcgactccctttct
aagctgaccaaggttgacgatctccggctcaagatcgcggaattgtttaaagtggagccc
cagaggcaaaggcttttttacaggggcaaacagatggaagacagccacaccatcttcgac
tacaatgtgggattgaacgacatcgtccagctcctggtccgacaggctgtccctaactgc
ctccctgctgttccgaaggaggcggagctctctgatactgattctggctgtggctccgcc
cagagcgagtcagacaaaaactccaataacggcgaggaggtggaaggccaggctggcacc
tctgcacagtctgatcctgtagagcctgcattcggctgctacaagattaacgagtttgtg
gatgcctgtgacctgaacatgggagcctggtttgaagctcagattctcaatgtgactaaa
gaacccaagagttcaagcgagtctggagaggataaaactgattctgcaaagcccagcaaa
gaggagactgtggttatgtatcacgtcaaatatgaagattatccagagaatggtgttgtg
aagctgactgggaaggatgtccgcccccgtgccaggacagtgtaccagtggcatcaacta
gaagtgggcatggtagttatggtgaacttcaaccctgatgaacccaaggagaggggtttc
tggtacgatgcagaaatccagaggaagagagaaacacgcaccgcacgtgaaatatatggc
aagatattgcttggagatgctggtgattctctaaatgactgtaagatcatgtttgtgaat
gaaatctacaagattgaagagccaggaagtgcagagggtgctgctttggagagccccatg
aaaagatcaaatggcccggagtgtaagcactgcaaagatgacccaaagaagaactgccgc
atgtgtaactgccatgtgtgtggggtgaagcaggatccagacaaacagcttctgtgtgat
gagtgtgaccaggccttccatatgtactgtctcgaccctcccctaacctccatcccagat
gatgaggactggtactgcccgaactgtaggaatgatgcaagtgaagtagttttagctgga
gagaagctgaaggagagcaagaagaaatctaagatggcttctgcaaactcatccacccag
agagactggggcaagggcatggcttgtgtcggtcgtacaaagcagtgcaccattgtacct
tcaaatcactatggaccaatccctggagttcctgtggggacacagtggaagtttagggtg
caggtcagtgagtcgggagtgcataggccgcatgttgcaggtattcatggaaggagcaac
gatggagcctactcgctggttttggctgggggatatgaagatgatgtggatgccggcaat
gaattcacctatacaggatctggaggccgggatctatctggaaacaagcgtacagctgaa
cagtcttgtgaccagaaactcacaaatatgaacagagctttggcttcaaactgcaacgct
gccttgaatgacaaggatggagccgaagccaaggactggaaagcagggaagccagtccgt
gtggtgaggtcctctaagggacgcaagcacagcaagtacagcccagaggacggcaacaga
tacgatggcatctacaagattgtgaagtactggccagagaaaggcaagtctggcttcttg
gtctggaggtatttattaaagcgacatgatgatgagccagccccatggaccagagacggg
aaggagaggataaagaagctggggcttactatgcagtatccagaaggctacttggaggct
caggctgccaaggagaaggaaaaagaaaacaaaaaggaagactatgacgaggaggaggag
ggtgaggtggagactcccagcaaaggcaaaaggaagagaaaatctcaaatagataaggag
acttcttccccagttaaaagcacacccaaaaagatgaaagtggaggcatataaactgaca
aaggagcagaaagggcttattaaggaggatgagctcaacaagaaagtttgggatgaggct
ctgacctcactcaaagaaggaccgaaattcctgaataaagtggaagaggtattcctttgt
atctgttgccaggaagtggtttttcaaccagtcacaacagagtgccagcataatgtctgc
agggaatgtttacagcgctcgttcaaggccgacgtctacacatgtcctgcttgcagacat
gatctgggcaagaactacagcatgactgtcaacaaaccactgcaaagccttttgagccag
ttctttccaggatacagcagtggccggtga
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