Polyodon spathula (Mississippi paddlefish): 121301163
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Entry
121301163 CDS
T07273
Name
(RefSeq) WD repeat-containing protein 18-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121301163
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
121301163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_alt
WD40
EIF3I
WD40_Prp19
WD40_WDHD1_1st
V-set
NBCH_WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WDR55
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_VPS8
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_IFT140_1st
Ge1_WD40
Ig_3
ig
Beta-prop_WDR75_2nd
I-set
Motif
Other DBs
NCBI-GeneID:
121301163
NCBI-ProteinID:
XP_041086235
LinkDB
All DBs
Position
27:2527034..2557093
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AA seq
327 aa
AA seq
DB search
MVYSKAVVPAGALSAITLKAAARSLSLSPGQTAVLDCSIERDSGELVSWYKQSPGDAPQF
VLNHYHTNSSAARYGSRFSSERFTARAKDPLTYQLLWEISSGEILLSVLFDVGIMSVTFD
PCEYSMFCGGSDGNIFQVALCGTNLQRDESFQTDREGNQVFKGHRNLVTCLSVSMDGTLL
LSGSHDETVRLWDIQSKQCVRTVNHKGSVTNAFIMPAPANMFQPDSRPTVGLPRFSRHLN
PSEPGEGGESGGVSLRLGLHMQGTEDSYLEKAGKLHELMCAATDKSVFGIGENTKVRVAE
LEDEVKKLKKINKDLYEFSTQILTKPH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggtatatagtaaagctgttgttcctgcaggggctctgtctgcgataacgctgaaggct
gcagcccgcagcctgtctctcagcccgggacagacagccgtcctggactgcagcattgag
agggatagcggagagctggtgagctggtacaagcagagccctggggatgcacctcagttt
gttctcaaccactaccacaccaacagctctgctgctagatacggctccagattctcctcc
gagcgcttcactgccagggcgaaggacccactcacctaccagctactttgggaaatctcc
tcaggggagatcctgctgtctgtgctcttcgatgtggggatcatgtccgtcaccttcgac
ccctgtgaatactcgatgttctgtggcggcagtgacggcaacatcttccaggtcgctctg
tgtggaacgaatctccagcgagacgagagctttcagactgaccgggaggggaatcaggtg
ttcaagggacacaggaacctggtgacatgtctgtctgtgtccatggatggcacgctgcta
ctgtcgggctcccatgacgagactgtaaggctgtgggacattcagagtaagcagtgcgtg
aggaccgtcaaccacaaaggctcggtgaccaatgcctttatcatgcctgctcctgcaaac
atgttccagccggacagccgaccaaccgtgggactgcctcgcttctcccgccacctgaac
ccctcggagccaggggaggggggagagtcggggggggtcagcctgcgcctggggctccat
atgcagggcactgaagactcgtacttggagaaggctggcaaattgcatgagttgatgtgt
gcagccacagacaagagtgtgttcggaatcggggagaataccaaggtgcgagtggcggag
ctggaggatgaggtgaagaagctaaagaagatcaacaaggacctttacgagttctcaaca
caaatcctgaccaagccacactga
DBGET
integrated database retrieval system
