Polyodon spathula (Mississippi paddlefish): 121301199
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Entry
121301199 CDS
T07273
Name
(RefSeq) cartilage intermediate layer protein 2-like
KO
K24436
cartilage intermediate layer protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121301199
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
121301199
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Gene cluster
GFIT
Motif
Pfam:
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
CarboxypepD_reg
CarbopepD_reg_2
I-set
Ig_2
TSP1_spondin
ig
LCAT
TTR_TEN1-4
Motif
Other DBs
NCBI-GeneID:
121301199
NCBI-ProteinID:
XP_041086276
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All DBs
Position
27:8015716..8028282
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AA seq
687 aa
AA seq
DB search
MRQCEKVMLLLPTLLAIAGAQDHTWGNSRFSKWKDRGGKNLGYNDLQEMQTSGVTEWTSW
FNIDHPGGSGDYERLEAIRFYYRERVCLRPQAIEARTTDWVSAGDTGEVVHSSTDKGFWC
INKEQSRGKLCSNYHVRFQCPLAEQSYWSAWTAWSGCSATACGSAGIQARERSCLSTKPL
GPLRFPVCEGKPMERRECATPPCPEATWGSWGSWSACAVTCGGGHRVRRRTCGTASDRKR
CFGRRVEVRKCGKSPCSACRRVCQEGRVNDDCSSCVCDGHALVGEVRSQQGAPLPGAVVS
LQERPRLTLARTDERGAFRIQGVCSSSASRTLFTIQREKYATLTLPAFSNSTGMSWIHAV
LQRAEKPYIVKHPETKVRYEGQRVTFCCLATGIPVPEKYYWYHNGTLLDRQVYKYDDNLL
LRDLKPLQAGEYHCKASNEMGGIKSSPAMLTIIGKKQPACEPKPEDYLIKLPMDCFQPGT
DSQYYNAGHCPHTKCAGSLNFDLRCKDGEDYCCGAKRIETREIDCGQYTLPIRAVTECGC
QKCIQPKVLVRGRVVAADTDEPLRFGHIYIGKERVGITGYKGTFTIQVPPDTKRLVVKFV
DRLQKFVDTVKVFPFDKKGGAVYHDVKVLRKQEPVDIDSAKATTLYLGEIKGEDPIGQIV
IPPNSFHKANGEVYQGTVKGSVTFLDP
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagtgtgagaaagtgatgctccttttacccaccttactggctattgctggggcg
caagatcacacctgggggaactcgcgcttctcaaaatggaaggacagggggggcaagaat
ctgggctacaatgacctccaggagatgcagacctcaggagtgacggagtggacgtcctgg
ttcaacatcgaccacccaggaggcagcggggactacgagcgcctggaagccatccgcttc
tactaccgcgagcgggtgtgcctgcggccccaggccatcgaggcgcgcaccacggactgg
gtgtcagcgggggacaccggcgaggtggtgcactccagcacggacaaagggttctggtgc
atcaacaaggagcagtcgaggggcaagctctgctccaactatcacgtgcgctttcagtgc
cctctagcagagcagtcatactggagcgcgtggacggcgtggagcgggtgctcagctaca
gcgtgcggcagtgccgggatccaagcccgggagaggagctgtctcagtaccaagcccctg
ggtccactgcgcttccctgtgtgcgagggcaagcccatggagaggagggagtgcgccacg
cctccgtgcccagaggcaacgtggggttcctggggctcctggtcggcctgtgctgtgacc
tgcggagggggacacagggtcaggcgcaggacctgcgggacggcctctgatcggaagcgg
tgtttcgggcgtcgggtcgaggtccggaagtgtgggaagtctccctgctcagcgtgccgc
cgcgtgtgtcaggagggccgcgtgaacgacgactgcagcagctgcgtgtgcgacggccat
gccctggtcggggaggtccgtagccagcagggggcgccactcccaggagctgtggtgtct
ctgcaggagcgtcccaggctgacactggccaggacagacgagaggggggccttccgaatc
cagggggtctgctccagctctgcctctcgaacactgttcaccatccagagggagaaatac
gccaccctcaccctgcctgccttcagtaacagcactgggatgtcctggatacacgccgtg
ctgcagagagccgagaagccatacattgtgaagcacccagagactaaagtgcgttacgaa
ggccagcgagtgaccttctgctgcctggccacagggatccccgtgccagagaaatactac
tggtaccacaacgggaccctgctggacagacaggtgtacaagtacgacgacaatctgctc
ttgagggatctcaagcccctgcaggcaggagagtaccattgcaaagccagcaatgaaatg
ggagggatcaagtcttccccagccatgctcaccatcataggcaagaaacagccagcctgt
gaacccaaacctgaggactacctgatcaagctgccaatggactgtttccaacccgggact
gattcccagtactacaacgctgggcactgcccccacaccaagtgcgcagggtcactgaac
ttcgacctgcgctgcaaggacggggaggactactgctgcggggcgaagcgcatagagacg
cgggagatcgactgcggccagtacacgctgcccatccgagccgtgaccgagtgcggttgc
cagaaatgcatccagcccaaagttctggtccgggggcgtgtggtggcagcagacacagac
gagcctctccggttcgggcacatctatatcggcaaggagcgagtgggcatcacaggctac
aaaggcaccttcaccatccaggtgccaccagacaccaagagactagtggtcaaattcgtg
gacaggctgcagaaatttgtggacacggtcaaggtgttcccgttcgataagaagggaggg
gccgtttaccacgatgtcaaagtgctgcggaagcaggaaccggtagatattgactctgct
aaagccaccactttatatctaggagagatcaaaggggaggaccccattggtcagattgtt
ataccacccaactctttccacaaggccaatggtgaggtctatcaaggcactgtcaagggc
agtgtgactttcctggacccc
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