Polyodon spathula (Mississippi paddlefish): 121301213
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Entry
121301213 CDS
T07273
Symbol
ap5z1
Name
(RefSeq) AP-5 complex subunit zeta-1
KO
K19025
AP-5 complex subunit zeta-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121301213 (ap5z1)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
121301213 (ap5z1)
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GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Motif
Other DBs
NCBI-GeneID:
121301213
NCBI-ProteinID:
XP_041086291
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All DBs
Position
27:8997594..9007108
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AA seq
704 aa
AA seq
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MPLPVLQDFHLNSSQGGNKDKVSSVARCVLKCLEARQPEGQSSRYLLPVLSKVISLSPDC
LTEDQINLVSRKLVDWLRYASIQQGVQLSSGGFFTSPRTRQPGPITEVDGAVAADFFTVL
CLGQSYTEDQWMNMHAFSMIRQWLLCYSTDGSGNGDTDDKSEVDGSVMSMVSATSTSSRL
LPPKERLREKAFEYCHRLIEQSDRKALKRSDAELQKACLIEAVTVMDIICREDPSFVYRA
FACVKALYGRLSGDLAFSRALLPIAQFYLNHSETAAVDSEAVYRQLFTQIPSELFQEPML
AFEFAQFCRMNVKVLRDSVSVFKHSFPNLFKPLAWNSPALISEYVELLPSLIGPDTAIEI
LHSLLDLPCLTAALAIQLRSASSQPSERIPLDQSAKVSSSMEAFRHPCYRGMFLYILRDE
AGTGDTIDRLSVLHEVLRDIADSPRIVQCAQTTPVLLQAFFNKAAQIADEKLINQLVLVI
LERSSLLYDIPNYKREVQRVFSSQLLVLCKLHPSLIVEQCKELMEFAGTTGNIQSKENFY
THVVWAIGEYLSVSYDKRCTVEQITAFFETLEAVLFEITQVRLSASIPTYSPRVITMLLT
TLSKLASRSQDLIPRVSLFLSKMRSFARSAGVSSWYSEEDIEEIHTRASELINLLKLPSV
AQFVLAPPTEGTSPRWHRDTNTSLPLAMRAVSKVLQRDSSFSPG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcccagttctacaggatttccatcttaattcttctcagggaggtaataaggac
aaagtgtcatctgtggctcgttgtgttcttaagtgtctggaggctcgccagcccgaaggt
cagagttcacgttacctgcttccagtcctgtcaaaggtcatcagcctttcccctgactgt
ttaactgaagatcagatcaacctggtcagtcggaagcttgttgattggctgcgatatgcc
agcattcagcaaggagtacagttatcatctggaggcttctttaccagtcctaggacaaga
cagccaggtccaatcactgaggtggatggggcagtagctgctgatttcttcaccgtcctc
tgccttggacagtcttacacagaggaccagtggatgaacatgcatgctttttccatgatc
aggcaatggttgctgtgctacagcactgatgggagtggtaatggggacacagatgacaaa
tccgaagtggacggctctgttatgtcaatggtctcggctacctccacatccagccgtctg
cttcctcccaaggagcgcctgagagagaaagcctttgagtactgtcatcgcctcatcgaa
cagagcgacaggaaagccttgaagaggtcagatgcggagcttcagaaagcttgcctgata
gaagcagttacagtgatggacatcatctgcagagaggacccttcctttgtgtaccgggcg
tttgcctgtgtcaaagcgctgtatgggaggctcagtggggacctggccttttccagggca
ctgctgcctatagcccagttctatctcaaccacagcgagacagcagctgtcgattctgaa
gcggtatacaggcagctgtttacccaaatcccatctgagttattccaggagcctatgctg
gcctttgagtttgcccagttctgcagaatgaatgtgaaagtgctccgggacagtgtgagc
gtcttcaagcacagcttccccaacctcttcaagccgctggcatggaatagccccgccctc
atctctgaatatgttgaactgcttccgtctctgattggtccagacactgccattgagatt
ctccattccctgctggatctgccctgtctaacggcagcccttgctatccagctaagatcc
gcctcctcccagccctctgaaaggatccccctggatcagagcgccaaggtatcgagctcg
atggaggcgttcagacacccttgctacaggggcatgttcctatatatactgagggatgag
gcaggcactggagacactatcgacaggttgagtgtgcttcatgaggtgctgagggacatt
gctgacagcccgcggattgtgcagtgcgctcaaaccacccccgtcctgctccaagccttc
tttaacaaggctgcacagattgcagatgaaaagttgataaaccagctggtgcttgttata
ctggagaggagcagtctgttgtatgatataccgaactacaagagggaagtacagagggtg
tttagctcccagctgctggtgctgtgtaaactgcacccctccctcatcgtggaacagtgc
aaggagttgatggaattcgcagggaccacaggcaacatacagagcaaggagaatttctac
acgcatgtggtttgggcgattggggagtacctgtctgtttcttatgacaagcggtgcaca
gtggagcagatcaccgcgttctttgaaaccctggaagcagttctgtttgagatcacccag
gtgcgcctgtcggccagcatccccacgtactccccccgagtgatcaccatgctgctgacc
accctctccaaactggcctcccgcagccaggacctcattcccagggtttctttgtttctc
tcgaagatgcgttccttcgcccgcagtgccggcgtgtcctcttggtacagcgaggaggat
atcgaagagatccacacacgggccagcgagctcatcaacctgctgaagctgcctagcgtg
gcccagtttgtactggccccgcccacggaggggactagcccacgctggcaccgggacacc
aacacctccctgcccctggccatgagggccgtcagtaaagtactgcagagagactccagc
ttctctccaggttag
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