KEGG   Polyodon spathula (Mississippi paddlefish): 121301250
Entry
121301250         CDS       T07273                                 
Name
(RefSeq) protein transport protein Sec31A-like isoform X1
  KO
K14005  protein transport protein SEC31
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121301250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pspa04131]
    121301250
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pspa02044]
    121301250
Membrane trafficking [BR:pspa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    121301250
Secretion system [BR:pspa02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   121301250
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_TEP1_2nd TPR_Sec16 WDR55 EIF3I WD40_MABP1-WDR62_2nd TPR_GEMI5 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_DCAF12 Prp18 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_IFT122_2nd WDR54
Other DBs
NCBI-GeneID: 121301250
NCBI-ProteinID: XP_041086351
LinkDB
Position
2:complement(78245410..78273335)
AA seq 1265 aa
MKLKEIDRTAMQAWSPAQQHPIYLATGTSAQQLDATFSTNAALEIFELDLTDTTLDMKSC
GTFSSSHRYHKLVWGPHGMSSEEHPSGVLIAGGENGNVILYDAAKIIAGDSDVVIAQNDK
HSGPVRALDVNSFQANLVVSGGNESEIYIWDLNNFDSPMTPGPKSQPLEDISCVAWNRQV
QHILASASPSGRASVWDLRKNEPIIKVSDHSNRMHCSGLAWNPEVATQLVLASEDDRMPV
IQMWDLRFASSPLKVLENHTRGVLAIAWSLADPELLLSCGKDNRILCWNPNSGEVLYELP
TSTQWCFDIQWCPRNPAVLSAAAFDGHISVYSIMGGSCDGQRQKQADQLTSSFGNLDPFG
TGQTLPPLQLRQPAVQQSTVMPLKKPPKWIRRPVGASFAFGGKLVTFGNVTVQPQQQQLV
PHHVYVSQVVTETDFLERSNQLQSAVQAGNFFNFCQSKVDASQTEFERNIWSFLKINFEI
DPRNKYLELLGYKKEELVKKIAAALEKDATVDGKAEEAVCETEQAVERVEGSPIAEEQTQ
GETEHPVDEDGGDADLKEQASEVKETLNISISGDVDGLITQALLTGDFEGAVDLCLHDNR
MADAIILAIAGGQELLTKTQEKYFAKTQSKITRLITAVVTKDWKEIVQSCDLQNWREALA
AVLTYARPDEFAALCGDLGTRLERDGDLNLQAQACLCYICAGDVEKLVACWTKAQDGNSP
LSLQDLVEKVVILRKAVEMSQGVSSNAAGALLAEKMIHYASLLAAQGSLSTAMAYLPSNT
DQTNIVHLRDRLYRAQGEQAPGAQVPYERQQATKGRASAKQAHPAGQMPQHQPQAQTQQY
YPQVRSAHTVTSWSNQTPTALPSIPPAASASDTQVEPPPPGFIMQGPANPVAASAAPGYM
YGQPSARQQYPQTYPQTQQYPQGMGGPSIYQPQQPTASPPPPPSPSASYPSHYLHSASSH
SVYTGQPPTSAMGPVSPASSFPPPASGASFQHGGPGAPASSYPPPLTGPTGTLPAAQNEL
PASQRTGGINTPDITCFLEGPQNGWNDPPSLSRVPKKKKLPDHYAPPVPITAPIMNPLGD
PQAQQSSLPPTFQPQQHPAGQPGLQPSFPGIQQPLLQPALQPSAPKLSAEGPPGAPIGDV
IQPFQSIPAEKITKKPIPDEHLVLKTTFEGLIQKCMNAATDPQTRRKLDDANKRLEFLYD
KLRDQTLSPTIVNGLHNIARSIETRNYMEGLNMHTHIVGNSNFSETSAFMPVLKVVLTQA
NKLGV
NT seq 3798 nt   +upstreamnt  +downstreamnt
atgaagctaaaagagattgaccgcactgcaatgcaggcctggagcccagctcagcagcat
cctatctatctggccactggcacttcggctcagcaacttgacgcaactttcagtacaaat
gctgcccttgagatttttgagctggatctcacagacactacactggatatgaaatcatgt
ggcacgttctcctcttcacacaggtatcataaactggtttggggaccacatgggatgagt
tcagaagaacatcccagtggagtcctcattgctgggggtgaaaatggaaatgttattctg
tacgacgcagcgaaaatcatagctggagacagcgatgtggtcatcgctcagaatgataag
cactctggaccagttagagcgctggatgttaattcgttccaggcaaaccttgttgtctca
ggaggtaacgagtctgaaatctacatttgggatctgaacaattttgattctccgatgaca
cctggaccaaaatctcagcctcttgaagacatcagttgtgttgcttggaacaggcaagtc
cagcatatcttggcttcagccagccccagtggacgtgcgtcagtgtgggacctgcggaaa
aacgaacccattatcaaagtcagcgaccacagcaataggatgcactgttcagggttggct
tggaaccctgaggtggccacccagctagtgcttgcatcagaagatgacaggatgcccgtt
attcaaatgtgggacctgaggtttgcctcctcgcccctgaaagtcctggaaaaccacaca
aggggtgtactggccattgcctggagcttggcagaccccgagttgctcctgagctgtggg
aaggacaacaggattctctgctggaaccccaactctggagaggtgctgtatgagctgccc
accagcacacagtggtgctttgatatccagtggtgtcccagaaacccagctgtcctctct
gcagcagcctttgatggacacatcagtgtctactctatcatgggaggcagctgtgatggc
cagaggcagaagcaagcagatcagctcacctcctcctttgggaatctggatccctttggt
actggccagaccctccctcccctgcagctccgtcagcccgcagtccagcaaagcacagtg
atgcccctgaagaaaccccccaagtggatacgcagacctgtaggagcgtcgttcgctttt
ggaggcaagctggtaacatttggaaatgtaactgtccaacctcagcagcagcagctagtt
cctcatcacgtttatgtgagccaggttgtcacggaaacagactttttggagcgctctaat
cagcttcagtctgctgtgcaggctggaaattttttcaatttctgtcagtctaaagtagac
gcttcacagactgaatttgagaggaacatctggtctttcttaaagatcaactttgagatt
gatcctcgcaacaaatacttggagcttttggggtataaaaaggaagaacttgttaagaag
attgctgctgcattagagaaagacgcaactgtagatgggaaagctgaggaggctgtttgt
gaaactgagcaggcagtggaaagggttgaagggagccccattgctgaagagcagacccag
ggagagacagagcaccccgttgatgaggacggaggggatgctgatcttaaagaacaagcc
tctgaagtaaaggagaccttgaacatctcgatcagtggggatgtcgatgggctcattact
caggccttgctcactggtgactttgagggtgctgtggatctctgtctccatgacaaccgc
atggcagacgccattatcctggccatcgcaggagggcaggagctcctgacaaagactcag
gaaaaatacttcgccaaaacgcagagcaagatcaccaggctgattactgcagtggtcaca
aaggactggaaggagattgttcagtcatgtgacctgcagaactggagagaggcgctggct
gctgtgctgacgtacgctcgtcctgatgaatttgcagccctttgcggtgatcttggtacc
cggctggaaagagatggagacctcaacctccaggcccaggcctgcctgtgctacatctgt
gctggtgatgtggagaagctggtagcatgctggaccaaagcacaggatgggaactcgcca
ctatccttgcaggacctggttgagaaggtagtgatcttgcgtaaggccgttgaaatgagc
cagggagtgagcagcaatgctgcaggggctctcctcgctgagaagatgattcactatgcc
agtctgctggcagctcaaggcagtctgagcactgctatggcctatctgccaagcaacact
gatcagacaaacattgtgcatttgcgtgacagactttatagagcacagggtgaacaagcc
ccaggagcacaggttccttatgagagacaacaggcaaccaaaggaagggcttccgccaag
caggcccacccagccgggcagatgccacagcaccagccacaagcccagacacaacagtac
tacccacaggtaagatctgcccatactgtcacttcctggagtaaccaaactcccactgcc
cttccaagtattccacctgcagcctctgcctcagacactcaggttgagcccccacctcca
ggtttcatcatgcagggacctgctaaccctgtagctgccagcgcagcccctggttatatg
tacgggcagcccagcgcacgacagcagtatccgcagacttaccctcagacacagcagtac
cctcaaggcatgggggggccatcaatctatcaacctcagcaacccactgcgtctcctcct
cctcctccttcaccctctgcttcgtacccttctcactacctgcactctgcatcttctcac
tctgtttacacgggacagcctccaacctcggctatgggacccgtctcacctgcttcctct
ttccctcctcctgcttctggagcctccttccagcatggcgggcctggagctccagcctct
tcttacccaccaccactgacaggaccaacaggtaccctgcctgccgcccaaaacgagctg
cctgcttcgcagagaacaggaggaataaacaccccagacataacctgcttcctagaagga
ccacagaatggatggaacgatcctcccagtctgagcagagtaccaaagaagaagaagctt
ccagaccactacgctcctccagttccaatcacagccccaataatgaaccccttaggggat
ccccaggcacagcagtcctctctcccacccaccttccagccccagcagcaccctgcagga
cagccagggctgcagccctccttccccgggatccagcagccgctgctgcagcctgctcta
cagccctctgcaccaaagctcagtgctgaagggccgcctggtgcacctataggagacgtc
atacagccctttcaatccataccggctgaaaaaatcaccaaaaagcccattcctgatgag
catctggtcctcaagaccacgtttgaagggctaattcagaagtgtatgaatgctgctaca
gatccacaaacaaggagaaagctggatgatgcaaacaaacgcctggagttcttgtatgat
aaactgcgtgaccaaacgctctctccaacaattgtcaatggtttacataacatcgccagg
agtattgaaacacgaaactacatggagggattgaacatgcacacccacatcgttggcaac
agcaacttcagcgagacgtctgctttcatgcctgtcctcaaagtagtccttacacaggcc
aacaagctaggggtataa

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