Polyodon spathula (Mississippi paddlefish): 121301275
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Entry
121301275 CDS
T07273
Name
(RefSeq) semaphorin-6B-like
KO
K06842
semaphorin 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Squash
Motif
Other DBs
NCBI-GeneID:
121301275
NCBI-ProteinID:
XP_041086419
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Position
27:complement(6638336..6686484)
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AA seq
887 aa
AA seq
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MTMQAPPLLLLTLLLQLANSAFPEQTQPLSTVPVGAVRQYPVFVGRSQGSVLRQEPLHIQ
RILQVNRTLYIGARDDLYRVDLDVLVGEEMFYSRKHTWKSNQNDIRVCRMKGKHEDECRN
FMKVLLSRRDGTLFVCGTNAFNPLCANYSSDSLELLGDTISGMARCPYDPKHANVALFAG
GNLFTATVTDFLAIDAVIYRSLGDGPALRTVKHDSKWFREPYFVSSVEWRGHVYFFFREM
AMEFNYLEKVLVSRVARVCKSDLGGSQRVLEKQWTSFLKARLNCSVPGDSLFYFNVLHST
TGVLQLDGRDVVLGVFSTPSNSIPGSAVCAFDMEQLDRVFQGRFKEQKSPESTWTPVPDE
AVPRPRPGGCALPGSRYNSSSSFPDEILTFVKTHPLMDEAIPSLGPQPWIIRTMVRYHLT
KIVVDTEAGPYRNNTVLFLGSDTGSILKFLIKPKSESNPANSSLFLEEFEGYNPDKCGGD
GPESRSMLAMSLDRPSRTLLLAFPSCVVRVPLARCQQHSLCMKSCISIQDPYCGWTKGST
CSFLEPGTRLPFEQDITHGNTSYLGDCHGLLQESFVEQRDGLVSVKLLMVSAVSAFAMGA
ALSGLAVCWFMGHQQRHCARSGAGGSGAVRHKGDKEQSMGGSVVSVTRPSGGQSETLLAP
LMMPNGWPKGMGVAVGGVMDLDSGGLLPTPEQTPLQQKRCPPGLRLSGGDPSWEQSHYLN
AGPGPSSSSSSSSSSSSIIYLNSKHLPRESRHCAQGEQREPQHYLSMAVRERSDRHSPAL
RNSSGEYPYPVTPQDSPDRRRVVSAPNTQLDFGEHLRWNPESLNFNSNNGSSSQSSRLYS
KPPPPHSGDHAFHGPLRSSHQPHPPALNGLAVQGREQADSIWPMRNK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgcaagccccacccctgctcctgctcaccctgctgctccaattggccaactct
gctttccctgaacaaacacagccactgagcacagtccctgtgggagctgtcagacagtac
cctgtgtttgtgggtcgatcgcagggctcggttctgaggcaggagcccctccatatccag
aggattctgcaggtgaaccgcactctctacatcggagccagagatgatctgtaccgtgtg
gatctggatgtgctggtgggggaggagatgttttacagcaggaagcacacctggaaatcg
aatcagaatgacatcagagtctgcaggatgaaaggcaaacatgaggacgagtgtcggaac
ttcatgaaggttctgctgagccggagggacggcacactgtttgtgtgcggaaccaacgcc
tttaaccctctgtgtgccaactactcctcggactctctggagcttcttggggacacgatc
agcgggatggcgcgctgcccctacgacccgaaacacgccaacgttgccctctttgcaggt
gggaacctgttcacggcgacggtgacagacttcctggcgattgacgctgttatttaccgg
agcctgggggacggtccagctctgcgcaccgtcaagcatgactccaagtggttcagagag
ccctattttgtcagctctgtggaatggaggggccacgtctacttcttcttcagggagatg
gcaatggagttcaactacctagaaaaggtcctggtgtctcgtgtggcccgtgtgtgtaag
agtgatctggggggctctcagagagtgctggagaaacagtggacctccttcctcaaggct
cggctcaactgctcagtcccgggagactctctcttctacttcaacgtgctgcactccacc
actggggtcctgcagctggacgggagagatgtggtgctgggggtcttctcaacaccgtcc
aacagtatccccggctctgccgtgtgtgcgttcgatatggagcagctggacagggtgttc
caggggcgcttcaaggagcagaaatctcctgagtccacctggaccccagtgccggacgag
gctgtacccagacccagacccggaggctgtgcacttccaggctccaggtacaactcctcc
agcagcttccctgacgagattctgaccttcgtgaagacgcaccccctgatggacgaggcc
atcccctcgctggggccccagccctggatcatcaggaccatggtcaggtaccacctcacc
aaaattgtcgtggacacagaggccggcccctacaggaacaacactgtcctcttcctgggc
tcagacacggggagcatcctcaaattcctcatcaaacccaaaagtgaaagcaaccctgcc
aacagcagcctcttcttggaggagttcgaaggatacaatcctgacaagtgcggtggagat
ggccccgagtccaggagcatgttagccatgtctcttgacaggcccagtcgcactctccta
ctggccttcccctcctgtgtggtccgggtcccccttgctcgctgccagcagcactccctg
tgcatgaagagctgcatctccattcaggacccgtactgcggctggaccaagggcagcacc
tgctccttccttgaacctgggaccaggctcccgttcgagcaggacatcactcacggaaac
acctcctacctcggggactgtcacggcctcctgcaggagagcttcgtggagcagcgggac
ggcctggtctctgtgaaactgctcatggtctctgcggtctctgccttcgcgatgggggcg
gcactatcgggcctggcggtctgctggttcatgggtcaccagcagcgacactgcgcccgc
agcggggcgggcggctcgggggccgtccggcacaaaggggacaaggaacagagcatgggg
ggctcagtggtgagcgtgacccggcccagtgggggccagtccgagaccctgctggccccc
ctgatgatgccaaacggctggcccaagggcatgggggtggcggtggggggcgtgatggac
ctcgattcggggggtctcctgcccactccggagcagacccctctgcagcagaaacgctgc
cccccgggtctccggctgagcggaggggaccccagctgggagcagagtcactacctgaac
gcaggccccggcccttcctcctcctcctcctcctcctcctcctcctcctccatcatctac
ctgaactccaagcacctgcccagggagagccggcactgcgcgcagggggagcagagagag
ccccagcactacctctccatggcagtgagggagcgctccgacaggcacagcccggctctc
aggaactcctctggggagtacccctaccccgtcaccccgcaggacagcccagacagaagg
agggtggtctcagcccccaacacccagctggattttggagaacacctgcgctggaatcca
gagagcctcaacttcaacagcaacaatgggtcgtcttcccagagcagccgtctttacagc
aagcccccacccccccacagcggtgaccacgccttccacggcccgctgaggtcatcgcac
cagccacacccacccgccctgaatggccttgctgtgcaagggagggaacaagcggactcc
atctggccaatgagaaacaagtaa
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