Polyodon spathula (Mississippi paddlefish): 121301318
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Entry
121301318 CDS
T07273
Symbol
ap3d1
Name
(RefSeq) AP-3 complex subunit delta-1 isoform X1
KO
K12396
AP-3 complex subunit delta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121301318 (ap3d1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121301318 (ap3d1)
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
AP-3 complex
121301318 (ap3d1)
Endosome - Golgi transport
121301318 (ap3d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
HEAT
HEAT_2
INTS1_R4
PDS5
RTP1_C1
RasGEF_N_2
Med19
Vac14_Fab1_bd
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
121301318
NCBI-ProteinID:
XP_041086519
LinkDB
All DBs
Position
27:8265761..8291482
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AA seq
1237 aa
AA seq
DB search
MALKMVKGSIDRMFDKNLQDLVRGIRNHKEDEAKFISACIDEIKHELKQDNIAVKANAVC
KLTYLQMLGYDVSWAAFNIIEVMSSSKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDL
SSPNQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
LDLLYGMVSKKNLMEIVKKLMIHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
ILVELTRLEGTRHGHVIASQMLDVAIRVKAIRSFAVSQMAMLLDNAHLLAGNTQRNGICE
VLYAAAWICGEFSEHLEEPMQTLEAMLRPKVTTLPGHIQAVYVQNAVKLFATVLARQEGA
GDRQAAQETTELLIEKLPQFVQSSDLEVQERASCILQLIKYIQKLQAKEVSVSEEVSALF
SGELNPVAPKAQKKVPIPDGLDLDSWINKPLREIESEDEKPRAIFQEEEPQHSRPRLPEI
DEKELAKRREVRKQEQASNPFYIKSSPSPQKETASVDHIPVVQIDLSVPLKVPGMPMSEQ
YVKLEEDRRQKQKQDKKKDKKKKEKEKKRGKGRRLDSVHTESEEDIPPAQSVDIMTEEMP
ENALPSDEDDKDPNDPYRALDIDLDKPLVDSDKLPVKTHRPTEGLKSPDPVAGVEEQDEK
RGSKKIKKDKEKKDKERKKNKEEKKKKKHRKSAPGEEVEEEGQVEKPAPPTAPPTEDSDL
DFWLSSAPVPSQSQPELVDPAPTSEPEEPKDEEEREESKSSKHKKQQHRKEKEEKSKKKK
KKKKQQHQDEGEGESVQNGTLEEEEEPLPPMSNYCLLAENSDIKMFTKEQGPVPGKVCDI
QGNLQDGSQVVVSIIFENKGSSFLKSMEFNVMDSLNAKLVRPDGASMHDGIAVPFQLPPG
VSNEARFVFTVQSIIMPQKLKGTLTFIVKTEDGSSHEKLDFKLLFTCTSYLITTPCYSDA
FAKLLESGELKTNSLKLEGITMPFHHLLAKICFHHHFSVVERIDSCSSMYSRSIQGHHVC
LLVKTGDKCVSIDAKCDDSTLLSNVLGEIKLTFAGTC
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggctctgaaaatggtaaaaggcagcatcgaccgcatgtttgacaaaaacctccaggat
ctcgtacgtggcattaggaatcacaaggaggacgaggccaagttcatctcagcatgcatc
gacgagatcaagcacgagctgaagcaggacaacatcgcggtgaaggccaatgctgtgtgc
aagctgacctacttgcagatgctggggtacgatgtcagctgggcagctttcaacatcatc
gaagtgatgagctcctccaagttcaccttcaagcggataggttacctggctgcctctcag
tgcttccacgaggggactgatgtcatcatgctgacaaccaatcagattcgcaaggacctc
agcagccccaatcagtacgacacgggcgtggcgctgactgggctgtcctgcttcgtgacc
ccagacctcgccagggacctggccaatgacataatgacgctgatgtcacacacaaagccc
tacatccgcaagaaggcagtgctgatcatgtacaaggtgttcctgaagtaccccgagtct
ctgcgccccgctttcccccggctcaaagagaaactggaggaccccgacccaggggtacag
tcagctgctgtgaatgttatctgtgagcttgccagacgcaaccccaaaaactacctgtcc
ctcgccccactcttcttcaaactgatgacctcctccaccaacaactgggtcctcatcaag
atcatcaagctgtttggagccctcactccacttgaacccaggctgggaaagaaactaatt
gaaccgctaacaaacctcatacacagcacctcggccatgtccctcctctatgagtgtgtg
aatacggtcattgcagttttaatatccctgtcttccggaatgcccaatcacagcgccagc
atccagctgtgtgtccagaaattgagaatcctgattgaagactctgatcagaacctgaag
tacctcgggctcctggccatgtcgaagatcctgaagactcaccccaagtctgtgcagtcc
cacaaggacctcattctgcagtgtctcgatgacaaggacgagtccatccggctccgagcc
ctcgacctgctctacggcatggtgtccaagaagaacctgatggagatagtgaagaagctg
atgatccacgtggacaaggcggaggggacgacctaccgagacgagctcctcaccaagatc
atcgacatctgcagccagtccaactatcagtacatcaccaacttcgagtggtatatcagt
atccttgtggagctcactcggttggaggggactcggcacggccacgtcattgcctctcag
atgctggacgttgcgatccgagtgaaggctatccgctccttcgccgtgtcccagatggcc
atgctgctggacaacgcacacttgctggccgggaacacgcagcgcaacgggatctgtgag
gtcctgtatgcggcggcctggatctgcggggaattctcagaacacctggaggagcccatg
cagactctggaagccatgctgcgccccaaggtgaccaccctgcctgggcacatccaggcc
gtgtacgtacagaacgccgtcaagctgttcgccactgtgctggctcgccaggagggggca
ggagataggcaggccgcgcaggagaccacagagctgctcattgagaaactgccgcagttt
gtacagagctcagacctggaggtgcaggagagggcgtcctgcatcctgcagctcatcaag
tacatccagaagctgcaggcgaaggaggtgagcgtgtccgaggaggtgagcgcgctcttc
tctggggagctcaatcccgtggcccccaaagcgcagaagaaagtgcccatcccagacggg
ctggatctggactcgtggatcaacaagcccctccgtgagatcgaatccgaggacgagaaa
cccagagccatcttccaagaggaggagccacagcacagccgccccagactgcccgagata
gacgagaaggagctggccaagcgccgtgaagtccggaaacaggagcaggccagcaacccg
ttctacatcaagagctccccgtccccgcagaaggagacggccagtgtcgatcacatccct
gttgtacagatcgacctctcggtgcccttgaaagtgccgggcatgcccatgtcagagcag
tacgtgaagctggaggaggacagacggcagaagcagaagcaggacaagaagaaagacaag
aagaagaaagagaaagagaagaagcgagggaaggggcggcgcctggactctgtgcacaca
gagagcgaggaggacatcccgccggcacagagtgtggacatcatgacggaggagatgcct
gagaacgcgctgccgagcgacgaggacgataaagaccccaacgacccctacagggccctg
gatatcgatctggacaagcccctggtggacagtgacaagctcccagtaaagactcacagg
cccacggaggggctgaaatcccccgaccccgtggcaggagtggaggagcaggacgagaag
aggggcagcaagaaaatcaagaaggacaaggagaagaaggacaaggagaggaagaaaaac
aaagaggagaagaaaaaaaagaagcacaggaagtctgctcctggggaggaagtggaagag
gaggggcaagttgaaaagcccgcccctccaacagccccgcccacggaggactctgatttg
gatttctggctttccagcgctccagtgccctctcagtcccagcccgagctagtggatcct
gcccccacgtccgagccggaggagcccaaagatgaggaggagagggaggagagcaaatct
tcgaaacacaagaagcagcagcacaggaaggagaaggaggagaaatcgaagaaaaagaag
aagaagaaaaagcagcagcaccaggatgagggggagggcgagtctgtgcagaacgggacc
ctggaggaagaggaggagcccctgccacctatgtccaactactgccttcttgctgagaac
tcggacattaaaatgttcacaaaggagcaaggaccggtacctggaaaggtgtgtgatatc
caggggaacctgcaggacggcagtcaggtggtcgtgtcgatcatctttgagaacaagggc
agcagcttcctgaagtccatggagttcaacgtgatggactctctcaacgccaagctggtg
cggcctgatggagccagcatgcatgacggaattgcagtgcccttccagctgccccctggt
gtctcgaatgaggcccgctttgtgttcaccgtccagagcatcatcatgcctcagaaactg
aaaggaaccctgacgttcatcgtgaagacagaagacggatcatctcatgaaaaacttgat
ttcaaactgctctttacatgcacgtcgtacctgatcacaacgccctgttacagcgatgct
tttgctaagttgttggagtctggtgaactgaagacgaattctttgaaactggaaggaata
accatgcccttccaccacctccttgcaaagatctgcttccaccaccacttctcagtggtg
gagcggatcgactcgtgctcatcgatgtacagccgctctatccaggggcatcacgtgtgt
cttctagtgaaaacgggtgacaagtgcgtgtccattgatgcaaaatgtgacgattcgacc
ctcctcagtaacgtgctgggtgaaatcaagctgacgtttgctgggacgtgctga
DBGET
integrated database retrieval system
