Polyodon spathula (Mississippi paddlefish): 121301322
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Entry
121301322 CDS
T07273
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
KO
K04497
groucho
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121301322
04330 Notch signaling pathway
121301322
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121301322
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
121301322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
121301322
NCBI-ProteinID:
XP_041086528
LinkDB
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Position
27:complement(5922100..5940179)
Genome browser
AA seq
664 aa
AA seq
DB search
MERAKQHQLQAQHLSHHAQGLPLTSHPSGLQHPGLAALGGGSSLLALSGALGAQAQLAAK
EERSHLEAVAAAAEHHRGFFRGAAFLAMETDREPGPSSLSNGDKGRAQADYLSNGKKRKA
EEKDFMTDYGSDADKSDDNLVVDEDPASPRSVHSYSSRENGLDKLHLQRKELAQVSPTSM
GSSGSAPSPSRGKEPPANEKSSTPGLKSSTPMPPSESSTPGPSSGASSSAPQFRPMPGKP
GVDPLALALRNPLSVQGSYPGAFGLAHSGVNGEMAAGAYAGLHLVSPQMNGAAVVAAANY
GRPPVVGYESPHSHPHLRVPGLPASMQAAATAAASGKPAYSFHVSADGQMQPVPFPPDAL
IGPGIPRHARQVHTLSHGDVVCAVTISNSTRHVYTGGKGCVKVWDVSQPGTKSAVAQLDC
LNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLATPTPRIKAELTSSAPACYALAISPDA
KVCFSCCSDGNIVVWDLQNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLR
EGRQLQQHDFTSQIFSLGYCPSGEWLAVGMESSNVEILHVSKPDKYQLHLHESCVLSLKF
ASCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISPDDQFIVTGSGDKKATVY
EVIY
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtgccaagcagcaccagctccaggctcagcacctatcccaccatgcacagggg
ctccccttgacctctcacccctctggcctgcagcacccgggtttggcagccctggggggg
ggctccagtctgctggccctctcgggggccctgggggcccaggcacagctcgcagctaag
gaggagcggagccacctggaggcagtggcagctgcagctgagcatcatagaggcttcttt
cggggtgctgcatttctcgccatggaaacggatcgggagccagggccgagctctttgtcg
aatggggacaaaggccgggctcaagcagactacctgagcaacggcaagaagaggaaagca
gaggagaaggacttcatgacagactatggcagtgatgctgataaaagtgatgacaacttg
gtggtggatgaggacccggcctccccacgcagcgtccactcctactcgtcccgagagaac
gggctggacaagctgcaccttcagcggaaggagctggcacaggtcagccccacttccatg
ggctcatccggcagtgcaccctccccgtcccggggcaaagagccccctgcgaatgagaag
tcgagcacgcccggactgaagtccagcactccgatgcccccgagcgagtcgtccacgccc
ggccccagttccggtgccagcagcagcgccccacagttcagacccatgcctgggaagccc
ggggttgaccccctcgctctggctctgcggaaccccctgtcagtgcagggctcgtaccct
ggtgcgttcgggctggctcactccggggtgaacggggagatggcggcgggggcgtacgca
gggctgcacctcgtctccccgcagatgaacggagccgcagtggtcgcggctgctaactac
gggcgcccacctgtggtggggtacgagtctccccactcccacccacacctcagagtgcca
ggactaccagccagcatgcaggcagccgccaccgccgctgcgtcagggaaacctgcctac
tcgttccacgtgagcgccgatgggcagatgcagccggtgcccttccctccggacgctctg
attggcccgggcatcccgcgccacgcccggcaggttcacacgctgagccacggagacgtg
gtgtgcgccgtgaccatcagcaactccacgcgccacgtctacaccgggggcaagggctgc
gtcaaggtgtgggacgtgagccagccgggcaccaagagcgccgtggcgcagctcgactgc
ctgaaccgtgataactacatccgctcctgcaagctcctccctgatgggcggaccctgatt
gtgggtggggaagccagcacgctgtcaatctgggacctggccacgcccaccccccggatc
aaggcggagctgacctcgtcggcgcccgcctgctacgccctcgccatcagccccgacgcc
aaagtgtgcttctcctgctgcagcgacggcaacatcgtggtgtgggacctgcagaaccag
accctggtcaggcagttccagggccacacggatggtgccagctgtatcgacatctcgaac
gacgggaccaagctgtggacaggcgggctggacaacacggtgcgctgctgggacctgagg
gagggcaggcagctccagcagcacgacttcacctcacagatcttctctctggggtactgc
cccagtggggagtggctggcagtgggcatggagagcagcaacgtggaaatcctgcacgtc
tccaaaccggacaagtaccagctgcacctgcacgagagctgcgtgctgtctctcaagttc
gcgtcctgcggtaaatggtttgtaagcactgggaaggataacctgctgaatgcctggaga
acaccctacggagccagtatattccagtcgaaggaatcctcctctgtcctgagctgtgac
atctctccagacgaccagttcatcgtcacgggttccggtgacaagaaagccaccgtttat
gaggtcatctactga
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