Polyodon spathula (Mississippi paddlefish): 121301353
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Entry
121301353 CDS
T07273
Name
(RefSeq) tight junction protein ZO-3-like isoform X1
KO
K06097
tight junction protein 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121301353
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Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Guanylate_kin
SH3_2
SH3_1
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121301353
NCBI-ProteinID:
XP_041086605
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All DBs
Position
27:complement(7479199..7500822)
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AA seq
1219 aa
AA seq
DB search
MAVRFKDEFTEMEDLKIWEQYTITLNKDSKVGFGIAVSGGWDKANPSSGDPAVIISDVVR
GGPAAGRLQTLDHIVMVNGVSMEKATSTYAIQHLKNCGRTANITVKRPRTIQVPVSAPRG
ISQTSSRSEDLSWRRDGPSDFDKGYPPPRRGSQGDRAPRSPSDLDSGSERSYDHSPSNSV
PKRWSPATSSAPSPTPDRNGNVLPLMSGYKRLPKHEDPYRPIKAVLVKKDPKEEFGLKLG
SQIFVKYMTPTGLASEEGTLQEGDVILKINGIVTENLSLEDTKRLVARSASKLSMTVLRD
DRQFLVCIPELQDSEVASNASSELEDISDLESELTLPPPQKKDSQASRGQHSERIRAEAM
QPDLRAARYPDKTDHPRWISTAGRHPNGDNSDPDSDRTPSPSPPRKKAIHNRGQHRDRTR
AESVQSARDSDSASVPRVLPAVMRRPVEDNSDSDRTPSPPQKDSRGQHRDSKRPTSKQPD
VREARGTDRASFPRWRRPTEGESGAAGHLADLCRTNFSDPGSETAPSEHTASLPREIHSQ
NSRGQYRERIQPQSAHDSDRDSLPRERTPSPPRRDGSLDSREKFNGRLPPAPNGKMLAGV
EVKEAPAVYAEREEEPIYCLPPATPPRQRAEPREEPNLGYSSDLKRISFVKEDTVGLQLA
GGNDVGIFVGGVKPGSLARHQGIEEGDQILKVNGVDFGSFTREEAALYLLQIPKGEQVII
HAQSKPDIYRKMLQSNVGDSFYIRTHFDHDGEGPGTLSFTRGDVFRVLDTMHRGKLGSWR
AVRMSNILQEADRGTIPNKSRAEQLASMEQTQKSSSNSTPSSRLRAEFWKLRGLRGAKKN
NRKSREDLSQLTIQGKFPPYEKVFLREATFKRPIVILGPLSDFAIQKLSTEMPAEFQTAS
MVPRNSEEGSSSVIKLETVRQISEQDRHPLLDITPSAVERLNYIQYHPMVLFLDPESRQD
VKAMRQRLCPESNKSSRRLYTQAVKMRKYCPHLFSARIQLLPNSNVWFEILKDRIKELQA
RPVWFSEDKAVSREEEEDLDALSRSRSTDYLSCDSRATSDYEDTDGEACTDNELDEAFKG
PALGRSSEPALPQHSEPALARSSEPVWEEEEEDISNKAYRTHNYSAEPQVWVSAPGAGAR
SPELESAPPDLREVPDLRGVPDQPKLPSFSQPQGQQQRLFGGPIDHQAVLWRRPQIRGSM
SSEEEQEDKDFDWGPATDL
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaggttcaaagacgagttcacagagatggaagacttgaaaatatgggaacaa
tatactataacgctgaacaaggattccaaggtgggattcgggatcgctgtctctgggggc
tgggacaaggccaacccttcctccggagatccggcagtcatcatttctgacgtggtgaga
ggaggtccggccgcggggaggttacagaccctggatcacatcgtcatggtgaacggtgtc
tccatggagaaagcgacctccacctatgccatccagcacttgaagaactgcggtagaaca
gccaacatcacagtgaagaggcctcggaccatccaggtccctgtctcagccccccgcggc
atctcccagacttcctcccgatctgaagacctgtcctggcggcgcgatggcccctcggat
tttgacaagggctacccgcccccgcggagggggtcccagggggacagggcaccccgttcg
ccctccgatcttgactcgggcagcgagaggagctacgaccattctcctagcaactctgtc
cccaagcggtggagcccagccactagctccgcccccagccccactcctgaccgcaatggg
aacgtcctgccgttgatgtctggatacaagaggctccccaaacacgaggacccctacaga
cccatcaaggctgtcctggtgaaaaaagaccccaaagaagaattcggtctcaagctgggc
agtcagatcttcgtgaagtacatgactcccacgggactggcctccgaggaggggactctg
caggagggagacgtcatcctgaagatcaatgggatagtgacagagaacttgtccctggaa
gacaccaagcgcctggtggcgaggtcggcgagcaagctgagcatgacggtcctccgtgat
gacagacagttcttggtctgcattccggagctgcaggacagcgaagtggcgagcaatgcc
tcctccgagctcgaggatatttcagatcttgagtctgagttaactctgcctccacctcag
aagaaagacagccaggccagcagggggcagcacagtgagagaatccgtgctgaagcgatg
cagccggacctccgggcagcacgatacccagacaagactgaccacccaagatggatctcc
actgcggggcgacatccgaatggagacaattcggaccccgattcagatcgcacgccctcc
ccctccccaccccgaaaaaaagctatccacaacagggggcagcacagagacagaacccgg
gctgaatctgtacagtcagcgcgtgactccgacagtgccagcgtgccaagagtgctgcca
gctgtgatgaggcgccctgttgaagacaattcggattcagatcgcaccccgtcaccacca
cagaaagacagcagggggcagcaccgagacagtaaacggcctacctccaagcagccagat
gtccgtgaagcaaggggcactgacagggcaagcttccccagatggaggcgtcctaccgaa
ggcgagtctggagcagctgggcacctagcagacctctgcagaaccaatttttcagaccct
ggctctgaaactgccccgtccgaacacaccgcatctttacccagggaaatacacagccag
aacagcagggggcagtacagggagaggatccagccgcaatctgcacacgactccgacagg
gatagccttccaagggaacgcaccccttccccgccccgcagggacggcagcctggacagc
agggagaaattcaacgggaggctgcctcctgctcccaatgggaagatgctggcgggagta
gaggtgaaggaagcccctgcagtgtacgctgagagggaagaggagccaatctactgcctg
cccccagcaacccctccgagacagagggcggagcctagagaagagccaaacctggggtac
agttctgatctgaagcgcattagcttcgtgaaggaggacactgtggggctgcagctggcc
ggagggaatgacgtgggcatcttcgtgggaggggtgaagccgggcagcctggccagacat
cagggcattgaggaaggggaccagatcctcaaggtgaacggtgttgattttggctccttc
acccgtgaagaggcagccctgtacctccttcagatccctaaaggagagcaggtcatcatc
cacgcccagagcaaaccagacatttacaggaagatgctgcagtccaacgtgggcgactcc
ttctacatccggacgcacttcgaccatgatggggaaggtccgggcaccctgagcttcacc
aggggggatgtcttcagagtgctggacaccatgcaccgtggcaagctgggctcctggcgg
gcagtgcgcatgagcaacatcctgcaagaggcagacaggggcaccatccccaacaagagc
agagccgagcagctcgccagcatggagcagactcagaaaagcagcagcaacagcaccccc
tcctccaggctccgtgcagagttctggaagctcaggggcctcagaggggccaagaagaac
aaccgcaagagccgggaagacctgtcgcagctcaccatccagggcaaattccccccttac
gagaaggtgttcctgcgggaagcaacattcaagcgtcccattgtcatcttgggtcctctg
agcgactttgcaatacagaagctgtccacagaaatgcctgcagagttccagactgcgtcg
atggtaccccgcaattcagaagaggggtcctcatcggtgatcaaactggagactgtgagg
cagatctctgagcaggacagacaccccctgctggacatcacgccctctgctgtcgagcgg
ctgaactacatccagtaccaccccatggtgctgttcctggacccggagagcaggcaggac
gtgaaggccatgaggcagcgtctctgtcccgagtccaacaagagctcccgccgcctctac
acccaggccgtcaagatgagaaagtactgcccccacctcttctctgcgaggatccagctc
ctgcccaattccaatgtctggttcgagatcctgaaggaccgcatcaaggagctgcaggcc
cgacccgtctggttctccgaggacaaggctgtgagcagagaggaggaggaggatctcgat
gctctgagtcgctcgcgctccaccgactacctgagctgtgacagccgagccaccagcgat
tacgaggacacggacggagaggcgtgcaccgacaacgagctggacgaggccttcaagggg
ccagccctggggcgctcctccgagccggctctccctcagcactcggagccggcgctggcc
cggtcctcggagcccgtctgggaggaggaggaggaagacatctccaacaaagcctacagg
acccacaactacagtgccgagcctcaggtctgggtcagtgcaccaggggcaggtgcacgg
tcccccgagctggaaagtgccccacctgatctccgagaggtccccgatctccgaggggtt
cccgaccaaccaaaactgcccagcttctcacaacctcaaggacagcaacagagacttttc
ggggggcctatagaccaccaggcagtgctgtggaggcggcctcagatcagaggcagcatg
agctccgaggaagagcaggaggataaagactttgactgggggccagccacagacctctag
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