Polyodon spathula (Mississippi paddlefish): 121301410
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Entry
121301410 CDS
T07273
Name
(RefSeq) occludin-like
KO
K06088
occludin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272
Virion - Hepatitis viruses
pspa04382
Cornified envelope formation
pspa04514
Cell adhesion molecules
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121301410
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121301410
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121301410
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121301410
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121301410
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121301410
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
TMEM164
DA_C
SAS4
MapZ_EC1
Spectrin_Anc-1
DASH_Dad1
T3SSipB
Keratin_2_head
YkyA
Motif
Other DBs
NCBI-GeneID:
121301410
NCBI-ProteinID:
XP_041086720
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All DBs
Position
27:complement(4936059..4950329)
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AA seq
524 aa
AA seq
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MMSRYDSPPMYSPPYSPSGYGPPGELLEPRSLPPDSFYIQEKPQYFFKWTSPPGVLKILE
AISLLLCLGIFACVASTLAWDMGYGGGMGLGMGMGGYGMGGYGMGGYGMGGYGGYGMGYG
GGYGMGYGSYGASTSPQASKGFMIAMAAIIFIAALAVFVVITTKSQSSRSRRFYLLVMVF
SGLLAGLELIATFVFIIGVNPMAQSSTSMYYSQVMMMCQSVYNSGAFVNQYLYHYCVVDP
QEAVAMVGGFLVAFAQALIIFFAYQTRSKIWRYGKHNIYWDKPLSADPEEGRDVEDWVNN
VQGGNSTHAETVEYSEKPTSQVNMISNSSPAKAGSYFSSGTYTDRSFPAATPLDRPPEYT
GPVVSSSPSEEEGGGVRRPAARRGKKKRRRNPELDESQYETEYTTGADTCDELDQGEWES
LYPPIRTDQERQEYKREFDLDLKVYKQLCAKMDDVNDQMNQLSRQLDSLQEDSPQYQGVA
EEYNRLKDLKQTPDYQANKLQCRQLRSKLFHIKSLVNSYDKQRP
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgcgctacgacagcccgcccatgtacagccccccttactccccgagcggatat
ggacccccgggggagctccttgagccgcgctccctccctcccgattccttctacattcag
gagaagccccaatacttcttcaagtggacctccccaccaggggtcttgaagatcctggag
gccatcagcctgctgctgtgcttggggatatttgcctgcgtggcgtccaccctggcctgg
gacatggggtacggcgggggcatgggcctggggatgggcatggggggttacgggatgggg
ggttacgggatgggcgggtacgggatgggggggtacgggggctatggtatgggctatggc
gggggctacggtatgggctatggcagttatggagcctccaccagcccccaggcctccaag
ggcttcatgatcgcaatggcggccatcattttcatcgcggccctggcggtctttgtcgtg
atcaccaccaagtctcagagctcccgcagccgcaggttctacctgctggtgatggtgttc
agcggcctgctggcggggctggagctgatcgccaccttcgtcttcatcattggtgtcaat
cccatggcccagagctccacctccatgtactacagccaggtgatgatgatgtgccagtcc
gtgtacaactcaggggccttcgtcaaccagtacctctaccactactgcgttgtggatccc
caggaggccgtggctatggtgggtggtttcctggtggcttttgcacaggctcttatcatc
ttcttcgcctaccagacgcgcagcaagatctggcgctacggcaagcacaacatctactgg
gacaagcctctaagcgcagacccggaggaggggcgtgatgtggaggactgggttaacaat
gtgcagggtgggaacagcactcacgccgagacagtggagtactctgagaagccaacctct
caggtcaacatgatcagcaacagcagcccagctaaggcaggcagctacttcagctctggc
acctacactgaccgcagtttcccggccgcgactcccttggaccgccccccagagtacaca
ggaccggtggtcagctccagcccctcggaggaggagggcgggggagtgaggcgccccgca
gccaggagaggaaagaagaagcgacgcaggaaccccgagctggacgagtcccagtacgag
acggagtacaccactggagcagacacctgcgacgagctggaccaaggggagtgggagagc
ctgtaccccccgatcaggacagaccaggagaggcaggagtacaaacgggagtttgacttg
gatctgaaggtgtacaagcagctgtgtgctaagatggacgacgtcaacgaccagatgaac
cagctgagccggcaactggacagcttgcaggaggacagcccccagtaccagggagtggct
gaggagtataaccgactgaaggacctgaaacagacccctgactaccaagccaacaagctg
caatgcaggcagctaaggagcaagctgtttcacatcaagagcctggtgaacagctacgac
aaacagcgcccctag
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