Polyodon spathula (Mississippi paddlefish): 121301416
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Entry
121301416 CDS
T07273
Name
(RefSeq) vasorin-like
KO
K24500
vasorin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121301416
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121301416
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_EndoS
LRR_9
fn3
hEGF
LRR_Zer-1
EGF
EGF_2
LRR_LRWD1
TM_ErbB1
TMEM154
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
121301416
NCBI-ProteinID:
XP_041086729
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All DBs
Position
27:9401931..9421471
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AA seq
660 aa
AA seq
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MKLLLLLLPFLAGVLTQACPKDCMCNTPKKIFCIYRKSALVPQGVPDDTVSLYLFENKIT
SLSAEDFAGLSKLELLDLSQNAISHLPSQVFRPLESLRNLDLSSNHIEEITNESFSGLRW
LERLYLHGNRISAIHPAAFDDLDHLLELKLQKNSLHVLPALHAPKLLLLDISFNQIPSLN
ARDLHTANLETLKLSGLGLSSLDGEMFENLGNLHELDLSDNQLTDFPIALKTLRGLTKLS
LAGNSQVSQLRNEDFHNLANLQELDVSNLNLQGLPEGFLKLFPRLQTLTAAENPFNCICP
LAWFPPWVRKSQVQLLRIEETRCHFPPLNAGKVLERLEHHDFGCPTTTTVITTKVSTSTS
KPGSTTGISLTLAPSQPSTQPPTAKEESTPAPVSPVANSKTSPKVLHICPSNICLNGGTC
QLDNLGELECACSKGFWGPYCENAEGTPETISTSTVETESTINARQVTSTSIAVDLHRYI
QARRHLKGIRLTYRNLSGPDKRPMHLNLPPSYPEYTLRGLRPNSTYYICASPMGEPEQQD
SCCVEAQISSQEHHSPVTQSYDGHLTTMVVPSVAAVLLVVVVAAVGFYYLRRRRAKDHKG
ADPCPLELEGVKSCLENGTLPPKGPEITQPQNGLECEVPLIHRHCPSNNNVPANMKNSYF
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctcctcctgctcctccccttcctcgctggagtcctcacacaggcctgcccc
aaagactgcatgtgcaacactcccaaaaaaatcttctgcatctatcggaaatccgcactg
gttccccaaggggttccagatgacacagtgagtctgtacctctttgagaacaagatcacc
tccttgagcgctgaggactttgctgggctgagcaagcttgagctcctggatctctcccaa
aatgctatctcccacctccccagccaggtcttccgcccgctggagtctctccgcaacctg
gacctctcgtccaaccacatcgaggagatcaccaacgagagcttctcggggcttcgctgg
ctggagcgcctgtacctacacggaaaccgcatctccgccatccatccggctgccttcgac
gacctggatcatctccttgaactcaagctccagaagaatagcctccatgtgctgccagcc
ctccacgctcccaagctgctcctcctggatatcagcttcaaccagatcccctcgctgaac
gcccgggacctccacacagccaacctggagaccctaaagctgtctggcctggggctcagc
tccttggacggagagatgtttgaaaacctcgggaatctccatgagctggacctctcggac
aaccagctgaccgatttccccatcgccctcaaaactttgcggggtctgacaaagctcagc
ctggcgggcaactcccaggtatcccagctgagaaacgaggacttccacaacctggccaat
ctccaggagctggacgtgagcaacctgaacctgcagggtttgcctgaaggcttcctgaag
ctctttcccaggctacagacactcactgcggcagagaaccccttcaactgcatctgcccg
ctagcctggtttcccccatgggtgcgcaaaagtcaagtgcagctgctgaggatcgaggaa
accagatgtcacttcccccctctcaacgctggcaaggtccttgaaaggctggagcaccac
gattttggatgtcctaccaccaccactgtgataaccaccaaggtcagcacgagcacttct
aagccagggtcgaccactggtatctcactaaccctagcacctagccagccctccactcaa
ccacccacagccaaggaagaaagcacaccagctccagtctctccagttgccaacagcaaa
acaagccccaaggtgttgcacatctgcccatccaacatctgcctgaatgggggaacctgc
cagctggataacctgggggagctggagtgcgcctgctccaaagggttctggggaccctac
tgcgaaaacgcagaggggactcccgagacgatatccacgtcaactgtagagacggagtcc
accatcaatgccaggcaggtcacaagcacgtcaatagcagtcgacctccaccgctacatt
caagccagacggcacctgaaagggattcgcctcacctacaggaacctctccggtccggac
aagcggccaatgcacctgaatctgccaccatcctacccagaatacacattgcgcgggctc
cggcccaactccacctactacatctgcgccagccctatgggggagccagagcaacaggac
agctgctgtgttgaggcccagatctccagccaggaacaccattcccccgtcacccagtcc
tatgacgggcatctgaccaccatggtggtgccgtctgtggctgctgtgctgctggtggtg
gtggtggcggccgtgggattctactatctccgcaggagacgtgctaaagatcacaaaggg
gctgacccttgccccttggaactcgagggggtcaagtcgtgtttggagaacgggactcta
cccccaaagggaccagagataacgcaaccccaaaacgggctggagtgcgaggtcccgcta
atacacaggcactgccccagcaataacaacgtgccggccaacatgaaaaactcttacttc
tga
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