Polyodon spathula (Mississippi paddlefish): 121301441
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Entry
121301441 CDS
T07273
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121301441 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121301441 (arhgef18b)
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121301441 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
C1_2
PHD_2
Motif
Other DBs
NCBI-GeneID:
121301441
NCBI-ProteinID:
XP_041086770
LinkDB
All DBs
Position
27:4305109..4343744
Genome browser
AA seq
1532 aa
AA seq
DB search
MGCVSSESVSPPSIAEDVFFSMTEEKNDSSGDTDSEDHTLDLNSSIEDILSLDPSLQGTE
YFRDLEIHLTGRTNAMQEMTASVNSCPCNKPQKNNGRCFQHKHSSNSCPGSLSYQESSES
TREPRQTTDTQDLCACADRQGDGSPVNTVKFLGDSKKDIAIEPETFPILLRTLSNSRRHS
WEYPVSPVDLGKRLSLDASAMDSDGEQGEADPPQLTESFTFPEGSPAGRINTAGEREEKD
PPQECPNPKPKDGSDPDDASKRLRSKSVVLLSERVGSARLSRSLEDWYPAPEEQKAREES
EKTPEEQCHMLMVTQVLQELKHYHGAKQRQETEGKASSSQDLTWYEFLSNANKEEDKTDK
VEKGTKVKRRLSSLRSRVAGSFQKDKGKNREKEQQKEKEREKEKEKEPKEKMQLRNGHQL
VPGTFSSCTTCTLCGKTLLRKPGLQCMNCGVNVHKSCKNLLGECSSSKLKRESQRNQTPG
SPQSTGHNQAGSFLKEQPRSAFSGPDGSCASSRSQGMTITQRGSNTQPTTSTSATHSNTY
GSITGEMEEIDGFIKLKQQSEDAVSLAPSTTESIVVEDAQYASLRGELEVDAQDIEAESW
SLAVDPAYLKKHQKEAVKRQDVIHELIQTEMHHVRTLKIMLSVYVRGIRENLQMDDSKVE
KIFPCVENLLEIHRLFLSRLKERRKESLEEGSDHNYVIHRIGDILVSEFSGEIGEKMKES
YGEFCSHHSEAVNFYKELLQNNKKFQNLIRKINNLSIVRRLGVPECILLVTQRITKYPVL
VERIIQNTEVGSVDHEELTRALGLIKDTITQVDAKVNDYENKTRLKDIASKMEPKSSGKF
KDGRLFRKEEILNGRRQLLREGMVYWKAASGRLKDILAVLLTDVLLLIQERDQKYTFATV
DSKPSVISLQKLIVREVAHEEKAMFLICASSAEPEMYEIHTTSKEECNTWMNLIRQAAES
CPDVEEGVSSDPEEERRLAEARALKLKEFQERLMSKDRQIVQSLSEKLQIFTEISEVMSG
FEDSTQGARSRLLVRGDPSDTLLGEQLLKGAVTEVENLQNLLISHGRTSWQAEDGLGSSG
LPRRAETFGGYESSPTVVNKNGSMKKKSYTVSYTGEHKLRERRGQLTSYDPELQDLWGDE
AAQQMADEVPEKSWHNVWSPPFHESEFIQCVQTLSQLLYSLQAIIAQQDSYMELQRASLP
DRDRQNRLRGNGLLEQEKQRNFEKQREEMANFQKLQSQLRLEQQRWERDREKQRRLAEVE
EERLKEREEECRQLQDRLRKEHEELEKQREKYQQDLERLRESTRTVEKERERVEQQKWNL
RKLKTMSFAPDTSQGNNRSHSISFNGDGFLNSEGAPQLPGKPQGRSSQPVAGADYLERPE
VLLRRENSTAEARPLMKSEVPIHLISTTNQLHKQTGVQQRIPTKLALLSSKGKDKGSRGK
GSHRTESAAADLRQLLPLRLSGKEDGTLKTKRSASPNQNFQQEPASPPDSLPDTTHLHPH
GMQKQNHQGSPQALSPQPSITEEVTKEDVIFF
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtgtgtcctcggaatccgtgtcccctccatccatcgcagaggacgtcttcttc
agcatgactgaggaaaagaatgactcatcaggtgatacagattctgaggaccacactctg
gatctcaacagcagcatcgaggacattctctcgttagacccctcccttcaggggacagaa
tatttcagagatctggagatccatcttactggaagaaccaacgccatgcaggaaatgacc
gcgtctgtgaacagctgcccatgcaacaagccacagaagaacaatggacgctgtttccag
cacaagcacagcagtaactcttgcccgggctccctttcttatcaagagagttccgagagc
accagggaaccccggcaaaccacggacacacaggatttatgtgcctgcgccgacagacaa
ggtgatggctctcctgtcaatacagtcaaattcctgggggactccaagaaggatatagcc
attgagcctgagacatttccaatacttctgaggactttgtccaactcgcggagacacagt
tgggaataccctgtatcgccagtggacctagggaaaaggttaagcctggatgcatctgcc
atggacagcgatggggagcaaggggaagcagaccctcctcagctgaccgagtccttcacc
ttcccagagggaagcccagcgggacggatcaatactgcaggagaaagggaagagaaagat
cccccgcaggagtgtcccaaccccaaaccaaaggatggatcggacccggatgacgctagc
aaaaggctcaggtcgaagtctgtggtgcttttgtcagaaagagttggttcggcccgcctg
tctcgaagtctagaggattggtatccagctcctgaagaacaaaaagccagagaggaaagt
gaaaagacccctgaagagcagtgccacatgctgatggtaacacaggtgttgcaagaacta
aagcattaccatggagcaaagcagaggcaggagacagaaggaaaagcatcatcttcacaa
gacctgacctggtatgaatttctctctaatgcaaacaaagaagaggacaagacagacaaa
gtggagaaaggaaccaaagtgaaacggaggctgagttctctgaggagcagagtagcaggc
tccttccagaaagacaagggtaagaatcgagaaaaagagcagcaaaaagaaaaggaaagg
gagaaagagaaggaaaaagaaccaaaagaaaagatgcaactgagaaacgggcaccagctg
gtgccgggcacattctccagctgtaccacttgcacgttgtgtggcaaaacactgctgaga
aagcctgggctgcagtgcatgaactgtggcgtgaatgtccacaagagttgcaagaacctg
ctgggtgaatgtagcagcagtaaacttaagagagagtcccagagaaaccagactcctggg
tctccacaaagcacaggacacaaccaagccggctcgtttctgaaggaacagccccggagt
gccttctcgggtcctgatggctcctgtgcttcctcacgcagtcaaggcatgaccatcaca
caacggggaagcaacactcagcccacaaccagcacctctgccacccactccaatacatac
ggatcaatcacaggagagatggaagagatagatgggtttataaaactaaagcaacagtca
gaagatgctgtctctctggctccgtccacaacagagtccattgtagtcgaagatgcacag
tatgcatctcttcggggggagctggaagtagatgcccaggacattgaagcagaatcatgg
agtctggctgttgaccccgcgtacttaaagaaacaccagaaggaggcggtgaagagacaa
gatgttatacatgagctgatccagactgagatgcaccacgtccggacgctgaagatcatg
ctgagcgtctacgtgcgaggaatcagggagaacctgcaaatggacgacagcaaggtggag
aaaatcttcccttgtgtcgagaacctcttggaaatccacagactgttcttatcccggttg
aaggaaaggcggaaagaatccttggaggaagggagcgaccacaactacgtcattcacagg
ataggtgatatcctggtgtcggagttttctggagagattggagagaaaatgaaggagagc
tacggggaattttgcagtcatcacagtgaagccgtcaacttttataaagagctgctacag
aataacaaaaagttccagaacttgattaggaaaatcaataacctgtctatagtaaggaga
ctaggagtgccggagtgtatcttgttggtcactcagcgcatcacaaagtatcctgtattg
gtggaaagaattatacagaacacggaagttggttcagtagaccacgaggagctgactcga
gctctgggccttattaaagacaccatcacacaagtcgatgctaaagtcaacgactacgag
aataaaacaaggcttaaagacattgccagcaaaatggagcccaaatcttctgggaaattc
aaagacgggcgcttgtttcgcaaggaggagatactgaatgggagacgacagctcttacgt
gaaggaatggtttattggaaagctgcttcggggcgtcttaaagatattctggctgtgctt
cttactgatgtgcttttgttaatacaagaaagggaccaaaaatatacatttgctactgtg
gatagcaaaccgtccgtgatctccctgcagaagctaattgtgcgagaagtggcccacgag
gagaaagccatgttcttgatttgtgcctcctcggcagagccagagatgtatgaaattcac
actacctccaaagaggagtgcaacacctggatgaacttaattcgccaggcggcagaaagt
tgtcctgatgtagaggaaggagtttcaagtgacccggaggaagaacgcagactggctgag
gcacgagcccttaaattaaaagaattccaagagcgcctaatgtctaaagacagacagatt
gtgcagagcctgagtgagaagctgcagatcttcactgagatctcagaggtgatgagcggg
ttcgaagactctactcagggggcgcgctcccggctgctggtgcgtggagacccctctgac
acgctgctgggggagcagctgctcaagggtgccgtcactgaagttgaaaatcttcagaac
ctgctgatttcccatgggaggacgagctggcaagctgaagacggactggggtcctcaggg
ttaccacgacgagcagagacattcggaggatatgaatccagccccactgttgtgaataaa
aatggcagcatgaagaaaaagtcttacactgtgtcctacactggggaacacaagctaaga
gaaaggagaggccagctgacaagctatgaccccgagctgcaggacctgtggggtgatgaa
gcagcgcaacaaatggctgatgaagtaccagaaaaaagttggcataatgtgtggagccct
ccctttcacgaatcggagtttattcagtgtgtgcagaccttgtcacaactgctttacagt
cttcaggccatcattgcgcaacaagacagctacatggagctccagcgagcgtctctgccg
gaccgggacaggcagaaccgactgcggggcaacgggctgctggagcaggagaagcagcgc
aatttcgagaagcagcgggaagagatggccaacttccagaagctacagagccagctgcgc
ctggagcagcagcgctgggagcgcgaccgggagaagcagcgacggctggccgaggtggag
gaggagaggctgaaggagcgcgaggaggagtgccggcagctccaggatcggctccggaag
gagcacgaggagctggagaagcagcgggagaagtaccagcaggacctggagcgcctgcgg
gagtccacgcggaccgtggagaaggagagggagcgggtggagcagcagaagtggaatctg
aggaagctcaagaccatgtcctttgcaccagacacgtcacagggcaataaccgcagtcat
tccatcagttttaatggagatgggttcctgaacagtgaaggcgcccctcagctgccaggg
aagccacagggccgttcgagtcagcctgtggcaggggcagattacctggagcgtccagaa
gtcttactgaggcgagagaacagcacggcagaggcccggcccttgatgaagtccgaggtg
cccatccacctgatcagcaccaccaaccagctccacaagcagactggtgtgcaacaacgc
atccccaccaagctggccctcctctcctccaagggcaaagacaagggcagcagaggcaag
ggatcccacagaacggaaagcgcagctgcagacctgaggcagttgctaccgctcagactg
tctggaaaggaggacggtactttaaaaacgaagaggtctgctagtccaaaccaaaacttc
caacaagaaccagcaagccctccagacagccttcccgataccactcatctgcacccacac
ggtatgcagaaacagaaccaccagggatcaccacaggccctctccccacagcccagcatc
actgaagaggtgaccaaggaggacgtcatctttttctag
DBGET
integrated database retrieval system
