Polyodon spathula (Mississippi paddlefish): 121301505
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Entry
121301505 CDS
T07273
Symbol
wdr24
Name
(RefSeq) GATOR complex protein WDR24
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121301505 (wdr24)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121301505 (wdr24)
Membrane trafficking [BR:
pspa04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
121301505 (wdr24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
ANAPC4_WD40
WD40_RFWD3
zf-RING_16
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
121301505
NCBI-ProteinID:
XP_041086909
LinkDB
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Position
27:complement(9514263..9522122)
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AA seq
789 aa
AA seq
DB search
MEKMARVTTALGSNTISGCTMFCHLDAPANAISVCRDAAQVVVAGRNIFKIYALEEEQFV
EKLNLRVGRKPSLNFSCADVMWHQMDENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPTEVYMLLSGSQDGYMKCFDLRKKESANTFSGQSESVRDVQFSVRDYFTFA
ASFENGNVQLWDIRRPDRYERMFTAHNGPVFCCDWHPDDRCWLATGGRDKMVKVWDITTN
RAKEIHCVQTIASVARVKWRPERKYHLATCSMMVDHNIYVWDVRRPFIPFATFEEHKDVT
TGIVWRHLHDPGFLLSGSKDSTLYQHKFKDASRPVDKANPEGLCFGLFGDLAFAAKESLI
SAGGDSNRKPYGGGGDRRYPIFFFKKPDLTEQFAHESSALSVFETDLESSRMDWFVKTAR
RYLLSGKPFGELCDHNAKVAEELSRPQVSTTWTMLRIMYSDPGSLTTATGISKGGSIPLM
NSFNMKEIAAGGLGSEGRLDRVKGEIRQDSTHLDPGNSLLNNNDENEETEGSEGPADYLF
GDAELEDDDLYPMEHENATAEEAEYILPQEAFPLRHEIVDNPSVPEHLQDKVDSPHVSGN
EAETVCLTPIKSFSLISISQPLYESHLPASFFSPVVREMLQHYAEAGDVQMAVSVLIVLG
DRIRKEVDELTQEHWYTSYIDLLQRFKLWNVSNEVIKLSTSSAINCLNQTSTTLHINCSN
CKRPMSNKGWICDRCHQCASICAVCHHVVKGLFVWCQGCSHGGHLEHIMNWLKSSSHCPA
GCGHLCEYT
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatggcgcgtgtgaccacggctctgggcagcaacaccatcagtgggtgcacc
atgttctgccacctggatgcccccgcgaacgccatcagcgtgtgccgcgacgccgcgcag
gtggtggtggccggccgcaacatcttcaagatctacgccttggaagaggagcagtttgtg
gagaagctaaacctgcgcgtgggccgcaagccctccctcaacttcagctgtgccgacgtc
atgtggcaccagatggacgagaacttgctggccacggcggccaccaacggcgcggtggtc
acgtggaacctgggcaaaccgtcccgcaacaagcaggaccagctgttcacggagcacaag
cggactgtcaacaaggtctgcttccaccccaccgaggtgtacatgctgctgagcggctcg
caggacggctacatgaagtgcttcgacctgcgcaagaaggagtcggccaacaccttttca
gggcagtccgaaagtgtgagggacgtgcagttcagcgtccgggattacttcacttttgct
gcatcctttgagaacgggaacgtgcagctgtgggatattcggcgccctgatcgatatgag
aggatgttcaccgcgcacaacgggccagtcttctgctgtgactggcaccctgacgaccgg
tgctggctggcaacggggggccgtgacaagatggttaaagtgtgggacataacgacgaac
cgcgccaaggagatccactgcgtgcagaccatcgcctcggtggcgcgggtgaagtggcgg
ccggagcgcaagtaccacctggccacctgctccatgatggtggaccacaacatctacgtg
tgggatgtgcgccggcccttcatccccttcgccaccttcgaggagcataaggacgtcacc
acgggcatcgtgtggcgccacctccatgaccccggcttcctgctctcgggctcaaaggac
agtaccctctaccagcacaagttcaaggatgccagccggcccgtggacaaggccaaccca
gaggggctgtgcttcgggctcttcggggacttggccttcgcagccaaggagagtctgatt
agcgccggtggtgactccaaccgcaaaccgtacgggggcgggggcgaccggcgctacccc
atcttcttcttcaagaagcccgacctcacggagcagttcgcccacgagtcgagtgccctc
agcgtcttcgagactgacctggagagcagccgcatggactggttcgtcaagaccgcccgc
cgctacctgctgagcggcaagcccttcggggagctgtgcgaccacaacgccaaggtagcc
gaggagctcagccgaccccaggtgtcgacaacctggaccatgctgaggattatgtattca
gatccagggagcctcactacagccacaggcattagcaaagggggatccatacctctcatg
aacagcttcaatatgaaggagattgcagcaggcggtctggggagcgagggcaggctggat
cgggtgaaaggggagattcggcaggacagcacccacctggacccaggaaactccctactc
aacaacaatgacgagaacgaggagacggagggcagcgagggtccggcggattacctcttt
ggagacgcggagctagaggacgatgacctgtacccgatggagcacgagaatgcgacggcg
gaggaggcagagtacatcctgccccaggaggcgttccctctgcgccacgagattgtggac
aacccctccgtgccagagcacctgcaggacaaggtggactcgccccacgtgagcggcaac
gaggcggagacggtgtgcctgacccccatcaagtccttctccctcatctccatctcccag
cccctgtacgagagccacctgccagccagcttcttcagccccgtggtgcgtgagatgctg
cagcactacgccgaggccggcgacgtgcagatggccgtgtccgtgctcatcgtcctggga
gaccgcatccgcaaggaggtggatgagctcacgcaggagcactggtacacgtcatacatt
gatctcctgcagcgtttcaagctgtggaacgtctccaacgaggtgatcaagctcagcacc
agcagcgccatcaactgcctcaaccagacctccaccaccctccacatcaactgcagcaac
tgcaagagacccatgagcaacaagggctggatctgcgacaggtgtcaccagtgtgccagt
atctgtgccgtgtgtcaccatgtggtgaaggggctctttgtctggtgccagggctgcagc
catggggggcacctggagcacatcatgaactggctaaagagcagctcacactgcccggcc
ggctgcgggcacctgtgtgaatacacctga
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