Polyodon spathula (Mississippi paddlefish): 121301593
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Entry
121301593 CDS
T07273
Name
(RefSeq) DNA-binding protein RFX2-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121301593
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Other basic domains
RF-X
121301593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
Pox_D5
Motif
Other DBs
NCBI-GeneID:
121301593
NCBI-ProteinID:
XP_041087044
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All DBs
Position
27:49766..80801
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AA seq
734 aa
AA seq
DB search
MQNSEGGSDSPATVALRTSTSAQAPVVQPVPASQQRVLVQATGSAQKGGQVQQLSVPRVQ
QVPQQIQQVQHVYPSQVQYVEGGEAVYTNGTIRTAYAYNPEAQLYGQGSSGPYFDSQAGS
AQVTTVVSSASGVPPHGMVGIAMDVGGSQIISSTGTYLIHGGGMDGNRHHTSHTSRSSSA
MLEMAIENLQKSEGIASHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEQKL
DPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDSQYMAMRQQ
PVHQKQRFKPLQKVDGMGDNLAGGAQNSAATPEQSVAAQSQHHQQFIDVSHVLPEFPAPE
IGTSSVPEGISMNDVKKLQILYREHCEATLDVVMNLQFHFIEKLWQTFWYSTAPSSDGAT
TVSPSEEESESVIPREKLIALCKYEPVRVWMRSCDHILYQALVEILIPDVLRPVPSTLTQ
AIRNFAKSLEGWLTTAMNDFPQEIVRTKAAVVSAFAQTLRRYTSLNHLAQAARAVLQNTS
QINQMLSDLNRVDFANVQEQASWVCQCEEGMVQRLEQDFKVTLQQQSSLDQWAAWLDNVV
NQVLKPHEGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL
VEHRVAQATGETPIAVMGEFSDLNSMMPLLMDKDQSHFSDDMSDVGSEADSSRGPSEPPV
KRERIELNHSLQEI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattcagagggaggatctgattcgccagccacggttgctctgcggacttcaacc
tcggcacaagcccctgtagtgcagccagtcccagcatcccaacagagggtcctggtgcag
gcaacaggctcagcccagaagggaggacaggttcagcagctttctgtacccagagtgcaa
caggtcccacaacagatacagcaagttcagcatgtgtacccatcccaagtccagtatgta
gaaggtggagaggcagtgtacaccaatggaaccattcgcacagcctatgcttacaaccca
gaggcccagctgtacgggcagggcagcagtggcccttacttcgactcacaggcagggagt
gcccaggtgaccacggtggtgtcttctgccagcggggtcccaccgcacggcatggtgggc
attgctatggacgtgggaggaagccagatcatctccagcactgggacctacctcatccac
ggaggaggaatggacgggaaccgacaccacacttctcacacctcccgttcctcatctgca
atgcttgaaatggcgattgaaaacctccaaaagtctgaagggattgcatctcacaaaagc
agcctgctcaacagccatctgcaatggctgctagacaactacgaaactgcagagggggtc
agcctccccaggagctccctctacaaccactaccttcgccactgccaggagcagaaactg
gatcccgtcaacgcagcctcctttgggaagctcattcgctctgtcttcatggggctgaga
accaggcggctgggcacaagagggaactcgaagtatcactactatgggatccgtctgaaa
ccagactctcccctgaatcgcttgcaggaagattcccagtacatggcaatgagacagcag
cctgtccaccaaaaacaaaggtttaagccgttgcaaaaggtggatggcatgggggacaat
ttagctggtggtgcccagaattcggcagcaaccccagaacagtctgtggctgctcaaagt
cagcatcaccaacagtttattgacgtgtcccatgttttgcctgaattcccagcccctgag
attggaacctcttcagtgcctgagggtatcagcatgaatgatgtgaagaagctgcagatc
ctctacagggagcactgtgaggcaaccctggatgtagtgatgaacctgcagttccatttc
attgagaagctatggcagacattctggtattcaacagcaccatctagtgacggagccact
acagtctctcccagcgaggaggaatcggaaagcgtcattcccagggagaagctgattgct
ctgtgtaaatatgagcctgtcagggtgtggatgcggagctgtgaccacatcctctaccag
gcactggtggagatcctcatccctgatgtactcagaccagtaccgagtacccttactcaa
gccattcgtaactttgcaaagagtttggaaggatggctgaccacggctatgaatgacttt
ccacaggagattgttcgcaccaaggcagcagtggtgagtgcctttgcccagaccctaaga
cgttacacctctctgaaccacctggctcaggctgccagggcagtgctgcagaacacttct
cagatcaaccagatgctgagcgacctcaatcgggtggactttgccaacgtgcaggagcag
gcatcctgggtgtgtcagtgcgaggaagggatggtccagcggctggagcaggacttcaag
gtgaccttgcagcagcagagctctctggaccagtgggcagcctggctggacaatgtcgtc
aaccaggtcttgaagccacatgagggaagccccagtttccccaaggcagcccgccagttc
ctactcaagtggtccttctacagctcgatggtgatccgtgacctgaccctgcgcagtgcg
gccagcttcggctccttccacctgatcaggctgctctacgacgagtacatgttctacctg
gtggagcaccgcgtggcccaggccacgggggagacacccatcgcagtgatgggagagttc
agtgatctcaactccatgatgcctttgcttatggataaagaccagtcccatttctcagat
gatatgagtgatgttgggagtgaggcggacagttccagaggaccgagcgagcccccagtc
aaacgggagcgcattgaactgaaccactctctgcaggagatctga
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