Polyodon spathula (Mississippi paddlefish): 121301597
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Entry
121301597 CDS
T07273
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121301597
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121301597
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Motif
Other DBs
NCBI-GeneID:
121301597
NCBI-ProteinID:
XP_041087053
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Position
27:complement(4966333..5008318)
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AA seq
1030 aa
AA seq
DB search
MRLVLVKTANEAGRLDSTGAFHDEGVLEQYHAGEQQDGAVEGMQHRHPGAVFQHHPLSQQ
PSSVNSSASHPQKPPSQEGSGASVQNRIPLSNCPPPPLFRQGSAAFLQQNQQEPSSSNPF
TQPGTIPPYYRLPPPPPPTRRNHVTGQRAQNQNQACCFSVQPLPLQQNRGAATTTAAAGV
TSEQKQHFYQSHCYSNCGYSRQASPNQHQNHLPQLSTTAATTPPILQHQNSNRGDHLQNA
SNYQRQQHPSSSVCRRREGGLGEQNRLQQQPQHHNQSNLHQHPSYCLAAPQEQNLEQQSK
DSGPLEVKRQFYLFQQQPRDWQPPPPLLQQRQQQLGSSQYNNYCTDGSGGEDINLLLQLQ
EQEQPHLFQQPQPPQHCDNYSKKPGEKNQLERHCCQYPQQDKQPNSHRQEPSRPLFGNLS
GGSSSSSGGSDNERSLSYSSNTCLWRQQHQEGNQIRTEQQQVNAEPKKLSHAGSKPSVCD
SSNPLPEIAMNSCKYNGGVVRPLGSLGSSRRNLAELDSETQPLQTLHSSGLEVVVSKGNG
EDPGKVSSDSLSRDGGGAPQKKNKDIGQKLGHRRALFEKRKRLSDYALIFGMFGIVVMVT
ETELSWGVYTKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTY
ERIFFIVLELLVCAIHPIPGQYVFTWTARLAFTYTPSVADADVDIILSIPMFMRLYLIGR
VMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRV
CERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVA
VVARKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKYTKLVKKIDHARVRKH
QRKFLQAIHQAQKLRSVKMEQRKLNDQANSLVDLAKTQNVMYDLVSELQERSEDLDKRIG
TIEDKLDSITGSLQALPGLLSQAITQQQRDFLDGFAQRFRPASLGSERSWTPTRHRRSPS
TAPHTSSDSG
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtattggtgaaaacggccaatgaggcgggccggctcgattctacaggggct
tttcacgatgaaggggttctggagcaataccacgcaggcgagcagcaggacggagctgta
gaggggatgcagcatcggcacccgggagctgtctttcagcaccaccctctcagccagcag
cccagcagcgtcaacagcagtgctagtcatccccagaaaccgccgagccaagagggctca
ggcgcttcggtgcagaaccgcatccctctcagcaactgtcctcctccgccgctgttcagg
cagggctccgccgccttcttgcaacagaaccaacaagaaccttccagctcgaaccctttc
acccagccaggtactatccctccttattacagattgccaccaccaccaccaccaacaaga
agaaaccacgtaaccgggcagcgagcgcaaaatcaaaaccaagcctgctgcttttctgtc
caaccccttcctctgcaacaaaatcgaggggccgctaccaccaccgccgcagccggtgtc
acttcagagcagaagcagcacttctatcagagccactgttacagcaactgcggttattcc
aggcaagcgagcccgaaccaacaccagaaccacctcccgcaactgtctacaacagcagca
acaacacctccgattctacagcatcagaattcgaatcggggggaccatttgcaaaacgcc
agcaattaccagcggcagcagcacccgagcagcagcgtctgccgcagaagagaaggaggg
ttaggggagcagaaccgtttgcagcagcaacctcagcatcacaatcagtccaacctacat
cagcacccctcctattgcctagcagcaccacaagagcagaatctagagcagcagagcaag
gacagcggtccattggaggtaaagcggcagttctatttatttcagcagcagccccgagat
tggcagccaccgccacctctactgcagcagcgacaacagcagctagggagcagccagtat
aacaactactgcaccgacggatcagggggagaggatataaatctactactacagctgcaa
gagcaagaacagccacacttgttccagcaaccgcagcctccgcagcactgtgacaactac
agcaagaaaccaggggagaaaaatcaattggagcggcactgctgccagtacccccaacaa
gacaaacagccgaatagccaccgccaagaaccgagccgcccgctctttggaaacttgtcc
ggcggcagcagcagcagcagcggcggcagcgacaacgaacgcagcctgtcctactcctca
aacacctgcctgtggcggcagcagcaccaagaaggaaaccagatccgaactgagcaacag
caggtaaatgctgagcccaagaagctaagccatgctggatccaagccctccgtctgcgac
agtagtaacccactccccgagatagccatgaacagctgcaagtacaatgggggcgtggtg
agacccctgggcagcctgggctcgtcgcggcgcaaccttgccgagctggactcggagacg
cagcccctgcagacgctgcacagctccggcctggaggtggtggtctccaagggcaatggc
gaggaccccggcaaggtgtccagtgacagcctgtcccgcgacggagggggcgcgccgcag
aagaagaacaaggacatcgggcaaaagctgggccaccgcagggcgctgttcgagaagcgt
aaacggctcagtgactacgctttaatcttcgggatgtttgggatcgtcgtcatggtgacc
gagacggaactttcctggggggtgtacaccaaggaatcctcatattcatttgcactgaaa
tgccttatcagcctttccactgttatattgcttggtctcattataatgtaccacgcccga
gagatccagctcttcatggtggacaatggggcggacgactggagaatagccatgacgtac
gagcgaatatttttcatcgttctggagcttctggtgtgcgccatccacccaatcccaggg
cagtacgtcttcacgtggacggcacgcctggccttcacctacacgccctcggtggctgac
gcagatgtggacattatactctccatccccatgttcatgcgcctctacctgatcgggcga
gtcatgctgctgcacagcaagctcttcaccgacgcctcgtcgcggagcatcggcgcgctg
aacaagatcaacttcaacacgcgcttcgtcatgaagaccctcatgaccatctgccccggg
accgtgctgctggtgttcagcatctcctcctggatcatcgctgcctggaccgtgcgcgtc
tgcgagaggtatcatgacaaacaggaagtgactagtaacttcctgggagccatgtggcta
atttcaataaccttcctctcgattggctacggagacatggtgcctcacacttactgcggg
aagggtgtctgtctgctgacagggatcatgggggccggctgcacagcgctggtggttgcc
gtggttgccaggaagctggagttgaccaaggctgagaaacacgtccacaacttcatgatg
gacacgcagctctgcaagcgggtaaaaaacacggctgcaaatgtactcagggaaacgtgg
ctcatctacaaatacacaaaactggtgaagaagattgaccacgccagggtgcgcaaacac
cagcgcaagttcctgcaagctatccaccaagctcagaaactgcgcagtgtcaaaatggaa
cagaggaagctgaacgaccaggcaaacagtttggtggacttggcgaagacgcagaacgtg
atgtacgacctggtgtcggagctgcaggagcgcagcgaggacctggacaagcgcatcgga
acgatagaggacaagctggactccatcacgggcagcctgcaggccctgcctggcctcctc
agccaagccataacacagcagcaacgtgacttcctagacggctttgcgcaacgcttcagg
ccggcttcgctggggtccgagaggtcctggacccccactaggcaccggcgctcgccctcc
accgcgccacacacctcctctgacagcgggtaa
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