Polyodon spathula (Mississippi paddlefish): 121301665
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Entry
121301665 CDS
T07273
Symbol
cilp2
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121301665 (cilp2)
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
121301665 (cilp2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
CarboxypepD_reg
I-set
Ig_2
CarbopepD_reg_2
ig
TSP1_spondin
LCAT
Motif
Other DBs
NCBI-GeneID:
121301665
NCBI-ProteinID:
XP_041087180
LinkDB
All DBs
Position
27:complement(8036557..8053781)
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AA seq
1226 aa
AA seq
DB search
MRQCEKVMLLLPTLLAIAGAQGVTEWTSWFNIDHPGGSGDYESLEAIRFYYRERVCVRPQ
AIEARTTDWVSAGDTGEVVHSSTDKGFWCINKEQSRGKLCSNYHVRFQCPLAVQSYWNPW
TTWSGCSAKACGGVGIQARERSCLSTKPLGPLRFPVCEGKPVERRKCATPPCQEATWGSW
GSWSACAVTCGGGHRARRRTCGTPSDRKRCFGRRVEVRKCGKSPCPACRLVCQDGSVNDD
CSSCVCDGHALVGEVRSQQGAPLPGAVVSLGERPRLTLAETDERGVFRIQGVCSSSADRT
LFTIQKEKYATLSLSAFSNSTGMSWIHAVLQRAEKPYIVKHPETKVRYEGQRVTFCCMAT
GIPMPEKYYWYHNGTLLDRQVYKYDDNLLLRDLKPLQAGEYHCKASNEMGGIKSSPAMLT
IIGKDQPSCEPKPEDYLIKLPMDCFQPGTDSQYYNAGHCPHTKCAGSLNFDLRCKDGEDY
CCGAKSIETREIDCGRYMLPVRAVTECGCQKCVQPKVLVRGRVVAADTDEPLRFGHIYIG
KERVGITGYKGTFTIQVPPDTKRLVVKFVDRLQKFVDTVKVFPFDKKGGAIYHDVKVLRK
QEPVDIDSAKATTLYLGEIKGEGPIGQIVIPPNSFHKANGEVYQGTVKGSVTFLDPRNIT
TAPAAPGDLNFVNEEGDMFPLRTYGMFSVEFRDETNKEVLETGRVQVFLDTEHVKMPEHI
PKMKLWSLNPETGIWEEESDFHFARSPAGRSKREERTFLIGNMEVRERRLFNLDVPESRR
CYVKVRAYINDKFLPNEQLEGVVVNLINLEPRAGYSSNPQAWGRFDSVITASNGACLPAF
CDGERPDAYTAYVTATMGGEELEAASSSPKMNPNVIGVSQPYLDKLGYQRTDHEDPALKK
MAFKINLAKPNPNNTDETNGPVYAYQNGIDCENAPVTANHFRFYRVEGDKYEYNVVPFQE
GDLTSWSGDYLSWWPNPQEFRACYIKVKINGPSEVMVRSRNKGGTHPQTKGKLYGIRDMR
STRDLRLPNSSAACLEFKCSGMLFDQSLVDRSLIAVIPQGDCRRVGVNSLLQEYLVKHPP
QFQNNESHAFNMLAPVDPLGHNYGIYTVTDQNPRLAKEIAIGRCFDGTSDGFSREMKSNS
GVALTFSCPERAVTRESLFQRLQNSPAQALAQIGRDMRERGQARPSPSQVVAYPSGQRSR
NMPAQSRRTLGTAGQRRGQARAQSRQ
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagtgtgagaaagtgatgctccttttacccaccttattggctattgctggggca
caaggggtgacggagtggacgtcctggttcaacatcgaccacccgggaggcagcggggac
tacgagagtctggaagccatccgcttctactaccgcgagagggtgtgcgtgcggccccag
gccatcgaggcgcggaccacggactgggtgtcagcgggggacaccggcgaggtggtgcac
tccagcacggacaaagggttctggtgcatcaacaaggagcagtcgaggggcaagctctgc
tccaactatcatgtgcgctttcagtgccctctagcagtgcagtcgtactggaacccgtgg
acgacgtggagcgggtgctcagctaaagcatgcggtggcgtcgggatccaagcccgggag
aggagctgtctcagcaccaagcccctgggtccactgcgcttccctgtgtgcgagggcaag
cccgtggagaggaggaagtgcgccacgccaccgtgccaagaggcaacgtggggttcctgg
ggctcctggtcggcctgtgctgtgacctgcggagggggacacagggccaggcgcaggacc
tgcgggacgccctctgatcggaagaggtgtttcgggcggcgggtcgaggttcggaagtgt
gggaagtctccctgcccagcgtgccgccttgtgtgccaggacggaagcgtgaatgacgac
tgcagcagctgtgtgtgtgacggccacgccctggtcggggaggtccgcagccagcagggg
gcgccactcccaggagctgtggtgtctctgggggagcgtcccaggctgacactggctgag
acggacgagaggggggtcttccgaatccagggggtctgctccagttctgccgatcggacc
ctcttcaccatccagaaggagaaatacgccaccctttccctgtctgccttcagcaacagc
actgggatgtcctggatacacgccgtgctgcagagagccgagaagccgtatattgtgaag
cacccagagactaaagtgcgctacgaaggccagcgagtgaccttctgttgcatggccaca
gggatccccatgccagagaaatactactggtaccacaacgggaccctgctggacagacag
gtgtacaagtacgacgacaatctgctcttgagggatctcaagcccctgcaggcaggagag
taccattgcaaagccagcaatgaaatgggagggatcaagtcttccccagccatgctcacc
atcataggcaaagaccagccatcttgtgaacccaaacctgaagactacctgatcaagctg
ccaatggactgtttccaacccgggactgattcccagtactacaacgctgggcactgcccc
cacaccaagtgcgcagggtcactgaacttcgacctgcgctgcaaggacggggaggactac
tgctgcggggcgaagagcatagagacgcgggagatcgactgcggccggtacatgctgccc
gtccgagccgtgaccgagtgcggttgccagaaatgcgtccagcccaaagttctggtccgg
gggcgcgtggtggcagcagacacagacgagcctctccggtttgggcacatctatattggc
aaggagcgagtgggcatcacaggctacaaaggcaccttcaccatccaggtgccaccagac
accaagagactagtggtcaaattcgtggacaggctgcagaagtttgtggacacggtcaag
gtgttcccgttcgataagaagggaggggccatttaccatgatgtcaaagtgctgcggaaa
caggaaccggtagatattgactctgctaaagccaccactttatacctaggagagatcaaa
ggggagggccccattggtcagattgttataccgcccaactctttccacaaggccaatggt
gaggtctatcaaggcactgtcaagggcagtgtgactttcctggacccccgaaacatcacg
actgccccggccgctcccggagacctcaactttgtcaacgaggaaggggacatgttccct
ctccggacctacggcatgttctccgtggagttccgagacgagaccaataaggaagtcctg
gaaaccggcagggtgcaggtgttcctggacacggagcatgtcaagatgcccgagcacatc
cccaagatgaagctgtggtccctcaacccggagacagggatctgggaggaggaaagcgac
ttccattttgctaggagccccgccggcaggagcaagcgtgaggaaaggaccttcttgatc
gggaacatggaggtccgggagagacgtctgttcaacctggacgtgcccgagagcaggcgc
tgttatgtcaaggtgcgggcctacataaatgacaagttcctgcccaatgagcagctggaa
ggggtggtggtcaacctaatcaatctggaacccagggctggctactcctccaacccccaa
gcctggggccgattcgacagtgtgatcactgcctccaacggcgcctgcctgccagctttc
tgcgacggagagcggccggacgcttacactgcctacgtcacggccaccatgggaggagag
gagctggaagcagcctcctcaagccccaaaatgaaccccaacgtcattggggtgtcccag
ccctacctggacaaactggggtaccagagaacagaccacgaagatcctgcgctcaagaag
atggctttcaagatcaacctggccaagcccaaccccaacaacactgacgagacaaacggg
ccggtgtatgcctatcagaacggcatcgactgcgagaatgccccagtcacagccaaccac
ttccgattctatcgcgtggaaggggacaagtatgagtacaatgtggtgccttttcaggaa
ggggacctgacctcctggtctggggactacctctcctggtggcctaacccccaggagttc
cgggcgtgctacatcaaggttaagatcaacgggccctcggaggtcatggtgaggtcgcgg
aacaagggcggcacgcacccccagaccaaggggaagctgtacggcatcagagacatgcgc
agcacccgcgacctgaggctgcccaactcctcggccgcctgcctggagttcaagtgcagc
gggatgctgttcgaccaaagtctggtggaccgcagcctcatagctgtcatcccccagggc
gactgcagacgggtgggcgtcaacagcctgctgcaggaatacctggtcaagcaccctcca
caattccagaacaatgagtcccacgccttcaacatgctggcgcctgtcgacccactggga
cacaactacgggatttacacagtcactgaccagaaccccaggctggcaaaggagatcgcc
atcggccgatgcttcgacgggacctcggatgggttctccagggagatgaagtccaactcg
ggggtcgcccttaccttcagctgcccggagagggctgtgaccagggagagtctcttccaa
cgcctgcagaactccccggcccaagcgctggcccagatcggacgagacatgagggaaaga
ggccaggccaggccaagtccttcccaggtggtggcttacccttcgggccaacggagcagg
aacatgccagctcagagccgcagaaccctggggaccgctggtcagaggaggggccaagca
agagcacagtccaggcagtaa
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