Polyodon spathula (Mississippi paddlefish): 121301676
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Entry
121301676 CDS
T07273
Name
(RefSeq) retinal homeobox protein Rx1-like
KO
K09332
retina and anterior neural fold homeobox protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121301676
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121301676
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121301676
NCBI-ProteinID:
XP_041087194
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Position
27:complement(7554522..7557751)
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AA seq
328 aa
AA seq
DB search
MHLSLGSMSMVDDSCLLPGNFHEMVKGGGAAVGGRVHSIDIILGFSKDQDPLLNPGGLGT
HKSDMESLGDPGKPDPTNPYGHLSSIRDHCDHAAFHDSGLFSNKCEGELSELRKGMESDG
KSPELLEEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAAKVNLPEVRV
QVWFQNRRAKWRRQEKMDASTMKLHDSPMLSYNRPPMSANMGPMSNTLPLDPWLTSPLSS
ATPVHSIPGFMGPPQGMQSGYPSHSYLNTPPAMAQGMQHMAPPPYQCASTFVDKYSLEDV
DQRSSSIAALRMKAKEHIQSMDKTWLPI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtcgctgggttccatgagcatggtggatgacagctgtctcttgcctggaaac
tttcatgagatggtgaagggtggaggagcggcagtgggggggcgcgttcacagtattgac
atcattctgggcttcagcaaggaccaggaccccctcctgaaccctgggggcctggggacc
cacaaatcggacatggaaagtctgggtgacccggggaaaccagaccccaccaacccctat
ggacacctctcctccatcagggaccactgtgatcatgcagccttccatgactccggcctg
ttctccaataagtgcgagggggagctgagcgagctgcggaagggcatggagagcgacggg
aagtctcccgagctgctggaggaggaggagcagcccaagaagaagcaccggcgcaaccgc
accaccttcaccacgtaccagctgcacgagctggagcgcgccttcgagaagtcacactac
cccgacgtgtacagccgggaagagctcgccgccaaggtcaacctgccggaggtccgcgtc
caggtgtggttccagaatcgccgtgccaagtggcgtcggcaggagaagatggacgccagc
accatgaagctgcacgactcacccatgctgtcctacaaccggccacccatgtcagccaac
atgggccccatgagcaacaccctgcccctggacccctggctcacctctcccctctccagc
gccaccccagtgcacagcatccccgggttcatgggccccccgcagggcatgcagtcaggg
taccccagccactcctacctcaacacccccccagccatggcgcagggcatgcaacacatg
gcacccccgccctaccagtgcgccagcaccttcgtggacaagtattcattggaggatgtg
gaccagcgcagctccagtatcgctgccctgcggatgaaagccaaggaacacattcagtcc
atggacaaaacctggctgcccatctga
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