Polyodon spathula (Mississippi paddlefish): 121301711
Help
Entry
121301711 CDS
T07273
Name
(RefSeq) signal transducer and activator of transcription 5B-like
KO
K11224
signal transducer and activator of transcription 5B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04012
ErbB signaling pathway
pspa04081
Hormone signaling
pspa04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
121301711
09133 Signaling molecules and interaction
04081 Hormone signaling
121301711
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121301711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121301711
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
121301711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STAT_bind
STAT_alpha
STAT_int
STAT_linker
SH2
TetR_C_12
Motif
Other DBs
NCBI-GeneID:
121301711
NCBI-ProteinID:
XP_041087231
LinkDB
All DBs
Position
28:complement(2566815..2616498)
Genome browser
AA seq
785 aa
AA seq
DB search
MAVWIQAQQLQGDALHQMQSLYGQHFPIEVRHYLSQWIESQTWDSIDLENPQEEFRAKRL
LDSLVQELQKKAEHQVGEDGFLLKIKLGHYASQLKSTYDRCPLELVRCIKHILYTEQRLV
REANDSSSPGGGLLDSMSQKHLQINQSFEELRMMTQDTENDLRKLQHNQEYFIIQYQESL
RIQAQLSSLSTLPPADRVLREPALQTKRATVEAWLTREANTLQKYRLDLAEKHQKTLQLL
HKQQTIILDDELIQWKRRQQLAGNGGPPEGGLDVVQSWCEKLAETNWQNRQQIRRAEHLR
QQLPIPGPIEELLTDLNKQITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKL
NVHMNPPQVKATIISEQQAKGLLKKENTRNDSSGEILNNNCVMEYHQATGTLSAHFRNMS
LKRIKRSDRRGAESVTEEKFTILFESQFSVGGNELMFQVKTLSLPVVVIVHGSQDNNATA
TVLWDNAFAEPGRVPFSVPDKVLWPQICEALNMKFKAEVQSSRGLSEENLVFLAQKAFSS
SSINPEEYRSMTMTWSQFNRESLPGRNFTFWQWFDGVMELTKKHLKPHWNDGAILGFVNK
QQAQDMLMSKPNGTFLLRFSDSEIGGITIAWVAENPNKAGERMVWNLMPYTTKDFSIRSL
ADRISDLNHLLFLYPDRPKDEVFSKYYTPPLSKAVDGYVKPQIKQVVPEFATASSDSTSA
SQYMDHASSPSVSHTHTYGMYPPSADSIMDGDGDFDLDDTMDVARHVEELLRRPMESQWI
GHTQS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtggatccaagcccagcagctgcaaggggatgccttgcaccagatgcagtct
ctgtatgggcagcactttccaatagaagttcggcattacctgtctcagtggattgaaagt
caaacatgggactcaatcgatctggaaaatccccaggaagaatttagagcgaaacgtctg
ctggatagtttggtgcaggagctgcagaagaaagctgaacatcaagttggggaggatggt
tttctactgaaaatcaaactagggcactacgccagtcaactgaagagcacctatgaccga
tgtcctttggagctggttaggtgtatcaaacacattctgtacactgagcagagacttgta
cgggaagcgaatgattctagctccccgggtggaggtctgctagacagcatgtctcagaaa
cacctccagataaaccagagcttcgaggagctgcgtatgatgacccaggacactgagaat
gacctgcgcaagctgcagcacaaccaggagtacttcatcatccagtaccaggagagcttg
cgcatacaggctcagctgtccagcctctctacgctcccgcccgctgaccgggtcttgaga
gaacccgctctacagaccaaaagagccactgtggaggcctggttaacaagggaagctaat
acactacagaaatacagactggatctagctgagaagcaccagaagacgctgcagttgctc
cacaagcagcagacgatcatcctggacgacgagctgatccagtggaaacggcggcagcaa
ctggcaggcaatgggggacctcctgagggaggcctggacgtggtgcagtcctggtgtgag
aagctggcggagacgaactggcagaacagacaacagatcaggagagcagaacatctacga
cagcagctgcccattcccggcccaatagaagagttactcaccgatctcaacaagcaaatc
acagacattatatccgcgctcgtgaccagcacctttattattgagaagcagccgccccag
gtgttgaaaacgcagacgaagtttgccgctacggtgcgcttgctggttggagggaagttg
aatgtccacatgaacccgcctcaggtgaaagccacgataatcagcgagcagcaagccaag
ggccttttgaaaaaggagaacaccaggaatgacagtagtggagagatcctaaataataac
tgtgtaatggagtatcaccaagccactggaaccctgagtgcccactttagaaatatgtcc
ctaaaaaggatcaagcgctcagatcgacgtggagcagagtcagtaacagaagagaagttc
acaatcctcttcgagtcccagtttagtgttggtggaaatgagctcatgtttcaagtaaag
acgttatcacttcctgtagtagtaatagtacatggaagccaagacaacaatgccacagcc
acagtcctctgggataatgcatttgcagagccgggacgggtgccattctcagttcctgac
aaagtgctttggccgcagatctgcgaggctctcaacatgaagttcaaggcggaggtacag
agtagcaggggcctgtcagaggagaatctggtgttcctggcacagaaagccttcagcagc
tctagcatcaacccggaggagtaccgcagcatgaccatgacctggtcacagttcaatagg
gaaagcttacctggccggaacttcacattttggcagtggtttgatggagtcatggagctc
acaaaaaaacacttgaagcctcattggaatgatggggccatcctggggtttgtgaacaag
cagcaggctcaggacatgctcatgtcgaagccgaatggcacatttctgctgcggttcagc
gactcggagattggcggcataacgattgcctgggtggcggagaatcccaataaagccggc
gagaggatggtctggaatttaatgccgtacacaaccaaagatttctctatccgatctttg
gctgaccgtataagtgacctgaatcatctgctctttctatatcctgacagaccgaaggac
gaagtgttctcaaaatactacacccctcctctgtctaaagcagtggatggatacgtgaag
ccacagatcaaacaagtagtaccagagtttgccacagcctcttcagattctacaagtgca
agtcagtacatggatcacgcctcttcaccatctgtaagccatacacacacatacggcatg
tatccaccgagcgctgactccataatggatggagacggtgattttgacctggacgataca
atggatgtagcaagacatgtggaagagctgctgcgtagaccaatggaaagtcaatggatc
ggacacacccaatcgtga
DBGET
integrated database retrieval system
