KEGG   Polyodon spathula (Mississippi paddlefish): 121301712
Entry
121301712         CDS       T07273                                 
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
  KO
K10374  tropomyosin 2
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04260  Cardiac muscle contraction
pspa04261  Adrenergic signaling in cardiomyocytes
pspa04814  Motor proteins
pspa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    121301712
   04820 Cytoskeleton in muscle cells
    121301712
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    121301712
   04261 Adrenergic signaling in cardiomyocytes
    121301712
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pspa04812]
    121301712
Cytoskeleton proteins [BR:pspa04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     121301712
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ ATG16 PUMA_CC Crescentin Laminin_I NBP1 DUF7179 Nuf2_DHR10-like HR1 XhlA Alanine_zipper FPP DUF1664 NPV_P10 Fez1 KH_DEAH11_2nd
Other DBs
NCBI-GeneID: 121301712
NCBI-ProteinID: XP_041087237
LinkDB
Position
2:79623956..79667502
AA seq 284 aa
MDAIKKKMQMLKLDKENAIDRAEQSETEKKVSEDKVKLLEEELQGLQKKLKGTEDELDKY
SESLKDAQEKLEQAEKKAADAESEVASLNRRIQLVEEELDRAQERLATALLKLEEAEKAA
DESERGMKVIENRASKDEEKMEMQDLQLKEAKHIAEEADRKYEEVARKLVILEGELERSE
ERAEVGEVKSADLEEELKNVANNLKSLEAQSEKYAQKEDKYEDEVRVLTEKLKEAETRAE
FAEKSVAKLEKTIDDLEDEVYAQKLKGKAICEELDLALTDMTAL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggatgccatcaagaagaaaatgcagatgctgaaattggacaaggagaatgctattgac
agggctgagcaatccgagaccgaaaaaaaagtatctgaggacaaggtcaaactgctggaa
gaggagctgcaggggctgcagaagaagctgaaagggacggaagacgagctggataagtac
tccgaatctctgaaggatgcccaggagaagttggaacaagcggagaagaaggctgccgat
gccgagtcggaggtggcctctctgaaccgtcgaatccagctggtggaggaggagctggac
cgcgctcaggagcgtctcgccaccgccctcctaaaactcgaggaggctgagaaggcagca
gatgagagcgagagaggtatgaaggttattgagaacagagcatctaaggatgaggagaaa
atggagatgcaagatttgcagctgaaagaagccaaacacattgctgaggaagctgaccga
aaatacgaggaggtggctcgtaagctggtcatcctggagggtgagctggagagatctgaa
gagcgtgcagaagttggggaagttaaatctgctgatcttgaggaagagttgaaaaatgtc
gccaacaacttgaagtctctggaggcccagtccgagaagtatgcacaaaaggaagataaa
tatgaggatgaagtcagagtcctaacggaaaaacttaaagaggctgaaacccgtgcggag
tttgctgaaaaatcagtagcaaaacttgaaaagacaattgatgacttggaagacgaagtg
tacgcccagaagctgaagggcaaggccatctgtgaggaactggaccttgccttgacagac
atgacagccctctaa

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