Polyodon spathula (Mississippi paddlefish): 121301734
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Entry
121301734 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: TANK-binding kinase 1-binding protein 1-like
KO
K12652
TANK-binding kinase 1-binding protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121301734
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GFIT
Motif
Pfam:
TBD
HV_Gp350_C-term
Zn-C2H2_12
Cep57_CLD_2
Mis12
Stonustoxin_helical
RskA_N
Motif
Other DBs
NCBI-GeneID:
121301734
NCBI-ProteinID:
XP_041087264
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Position
28:1670517..1689820
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AA seq
666 aa
AA seq
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MDSLFSGELGMLTAEGLAEEGCGVGWASRPLRGDMYATPHFTLITAYQDIKNQLSGLEKE
NCGLKRRLKLYEIKFPMISDFSDDRNSYCSFETMDTSLLNNSLQQQLNRLRHELQKGKER
EEHLEDVIQTYEKSHMERSNLQRXIVCGGMTTLAEKHVERIRNVEQMLRQRDSSLQNLNM
QLRSKEMQYLQLHASPARPHPRMLACPAMTLQSSRSLDAVSDLELQRLEAELEEARREAG
EACRREAELKGECERLQEELRQQQEGQRQGEMTTHCVQCDVEWIKKAGDEQVNLALAYTE
LTEELSRLQSLSSKQTEILRSLSQEQPVQRHSPVPQRHSPVPQRHSPVPQRHSPVPQRHS
PAPERHSPAPERHSPAPERHSPAPERHSPVPQRHSPAPERHSPAPERHSPAPQRHSPAPE
RHSPVPQRHSPAPERHSPVPQRHSPAPERHSPVPQRLSPDVQRRSPLPDSNDGPASYTSR
PTSHHLRASFQGRRSYSEVSDPAAYQRPPRLQLDPVSTLPKPRPYREGYHKQGLSSSVTS
SPLRTRDPFTPQELLHLRFDKPARPSLQSSEDEEEWARPSAPSAATPPGSIRGVPSCSAF
PILKTIPHPSSSATEHAQSWPSINLWMETEDSDIRNCPLCQLTFPFGYPDDALIKHIDTH
LENSKI
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggactctctgttcagtggggagctgggcatgctgacggctgaggggctggcggaggag
ggctgtggggtgggctgggcaagcaggcccctcaggggggacatgtacgccaccccccac
ttcaccctcatcaccgcctaccaggacataaagaaccagctctccgggctggagaaggag
aactgcgggctcaagaggagactcaaactctacgagatcaagttccccatgatcagcgac
ttcagcgacgatcgcaactcctactgctccttcgagaccatggacacttcactactgaac
aacagcctgcaacagcagctcaaccggcttcggcatgagctccagaaaggcaaggagagg
gaggagcatctggaggatgtaatccagacctacgagaagagccacatggagaggagtaac
ctgcagagataaatcgtttgtggggggatgaccacgctggcagaaaagcacgtggagcgc
attcggaacgtggagcagatgctgcggcagagagacagctccctgcagaacctcaacatg
cagctgcgcagcaaggagatgcagtaccttcagctgcatgccagccccgcccgcccccac
ccccgcatgctggcctgtcccgcgatgaccctgcagagctcgcgcagtctggacgcggtc
tccgacctggagctgcagcggctggaggcggagctagaggaggcacggcgggaggcaggg
gaggcgtgtcgccgggaggcggagctcaagggggagtgcgagcggctgcaggaggagctg
agacagcaacaggagggacagcggcagggggagatgaccactcattgtgtccagtgtgat
gtggagtggatcaagaaggctggcgatgagcaggtgaacctggccctggcctacactgag
ctaacagaggagctgtcccgattgcagagcctgagttccaaacagaccgaaatactgagg
agtctgtcccaggagcaaccagtccagcggcactccccggtccctcagcggcactccccg
gtccctcagcggcactccccggtccctcagcggcactccccggtccctcagcggcactcc
cctgcccctgagcggcactcccctgcccctgagcggcactcccctgcccctgagcggcac
tcccctgcccctgagcggcactccccggtccctcagcggcactcccctgcccctgagcgg
cactcccctgcccctgagcggcactcccctgcccctcagcggcactcccctgcccctgag
cggcactccccggtccctcagcggcactcccctgcccctgagcggcactccccggtacct
cagcggcactcccctgcccctgagcggcactctcctgtcccccagaggctttcccctgac
gtccagcggaggtcccccctgcccgactcgaacgacggtccggcttcctacaccagtcgc
ccgaccagccaccacctgcgagccagcttccaggggcgcaggagctactctgaggtcagc
gaccccgccgcataccaacgtccaccccgtctgcagctcgacccggtctccaccctgccc
aaaccccggccctacagagagggttaccacaagcaggggctgagcagcagtgtgaccagc
agccccctccgcacccgcgatcccttcaccccgcaggagctcctccatctgcgtttcgac
aagcccgcccggccttccctccagtcctccgaggacgaggaggagtgggcccgccccagt
gccccctccgctgccacccccccaggctcgatcagaggagtgccttcctgctccgccttc
cccatcctcaaaaccatcccccatccctcctcctctgccacagaacatgcccagtcctgg
ccctctatcaatctgtggatggagactgaggactctgacatcaggaactgcccgctgtgt
cagctgaccttcccatttggttaccccgacgatgccctgatcaaacacatcgacacacac
ctggagaacagcaagatctga
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