Polyodon spathula (Mississippi paddlefish): 121301815
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Entry
121301815 CDS
T07273
Name
(RefSeq) probable E3 ubiquitin-protein ligase MARCHF10 isoform X1
KO
K10665
E3 ubiquitin-protein ligase MARCH10 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121301815
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121301815
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
121301815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINGv
zf-RING_2
FANCL_C
Motif
Other DBs
NCBI-GeneID:
121301815
NCBI-ProteinID:
XP_041087358
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Position
28:525265..532059
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AA seq
810 aa
AA seq
DB search
MTVALTMSEGRRRRGVITDAAFMSDVRQKMDIEYQLSLRRQELYRAQAELKRESRVKQQR
LASTTSIKHRAQNHERPWATDFTRKLAASSAHPVSEGHSANKGSVSHLPAIANKAELKRQ
KLAATSKKQERKNLSCHPAGNQISGTENSAPKKHQRTVKKTHKFCYSYSETPHMLTPKSM
PKFSDGASPGLRLGGRPKRKSHQDKQSSSVSLEHKAPARHLNRKSNNLQMLTSSHSTEAG
KLPPRKSHIPCPLNEHQSAEGPFRFRDEDFLRTLDEGQESSDEDDRNDLSDESDDLRSSS
QNSTAGLPQGSNSSLGRSTVMDSTSPFTLRGLSCSLDYCTGPQSNFEPLDTFSSDTENED
LEISHLSTRSNMSNTQDRSSDSEYCLNTNSGNYNSSVAPQRASFLTTAVGNRVQDNEEFG
SSIVNHALGNGLNNSTMRQCPNIPSDNLARMSNEDHQDLIPPIRQSATLSTSFTSNTRPN
PDRNQRNSNLLSNTLEPSLQLPSLDPRFTSLTSLLSPMGMGNSTYARWAGSNESLAIISN
PERVIRQPLNRSSLSRETVQANAGIETASEPSAPSLVAVNPIPVLSSFTAPSTLRDHLPI
ALMALSELRGQAGSMSQGSASRPAADPEKLRKIKESLLEEDSDEDEGDLCRICQSGVGTL
TNPLLEPCQCTGSIQYVHQDCLKQWVQAKIKAGAELSVIRTCELCKESLKLDMDGFDVED
CYQKHRNARNQEDLSHTGMYLVLLLHLYEQRFAELLRLSHSRYSNYRLARAHPLQRSGES
ERTIPDEDGHSSENQMQVLTHGNSSPRRDT
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgccctcaccatgtctgagggcaggcgaagacgtggggtcatcacagatgcg
gcctttatgagcgatgtccgtcagaaaatggatatagagtatcagctgagcctccgcagg
caagaactctacagagctcaagcagaattgaaacgcgagagccgagttaagcaacagaga
ctcgcatcaacaacatcgataaaacacagggctcagaaccacgagagaccctgggcaaca
gactttaccaggaagctagctgcttcatctgctcaccctgtcagtgaaggacattcagcg
aacaaaggatctgtgtcccatctccctgctattgccaacaaagcagaactcaagagacag
aagctggcagccacttcaaagaaacaggaaagaaaaaatctttcctgtcatcccgctgga
aatcaaatttcaggtaccgagaactctgcacctaagaaacatcaaagaacagtgaaaaaa
acacataaattctgttactcatattcagaaacgccccatatgttgaccccgaaatccatg
ccgaagttctctgatggagcttctcctggtttgcgtctgggaggacggcccaaaagaaaa
agccatcaagacaagcagagctcaagtgtaagcttggaacataaagcaccagcaaggcat
ttaaacagaaaatccaacaacttacaaatgttaacatcctctcattccaccgaagcaggt
aagctgccaccccgcaagtcccatattccctgtcctcttaatgagcatcagtctgcggag
ggtccatttaggttcagagatgaagactttcttagaactttagatgagggacaagagagc
agtgatgaggacgatagaaatgacctttcagacgagtctgatgatctgcgtagttcttca
cagaactccactgctggattgccacagggatcaaatagttccttagggagaagcactgtc
atggattccacttccccttttacattaagaggtttatcctgcagcctagactattgcact
ggcccacaaagcaattttgaacctttggacaccttttcttctgacacagagaatgaggac
ctggagatcagccatttgtccaccagatctaacatgtccaacacccaggatcgatcttca
gattcggaatactgcttaaatactaacagtgggaattataattcaagtgtagcccctcag
agggcaagtttccttaccaccgctgtaggtaatcgtgttcaagacaacgaagaatttggg
agttcaattgttaaccatgctttgggcaatggactcaataacagtaccatgaggcaatgc
ccaaatatcccttctgacaatttggccagaatgtccaatgaggaccatcaggaccttata
ccacctataagacaaagtgctactctgtccacaagctttacatctaatacaagaccaaat
cccgacagaaaccagagaaacagcaacctgctctcaaacacgctagagccgtcactacag
ttaccaagtctggacccaagatttacctctttaacaagtctgctgtctccaatgggaatg
ggaaattccacctatgccagatgggcaggaagcaatgaatcgttggcaatcatcagcaac
cctgaacgggttatcagacaaccactgaatagaagcagcctttcaagggaaacagtgcaa
gctaatgcaggaattgagacagcatcagagccaagtgctccctcattagtagctgttaac
ccaatcccggtgctgtctagtttcacagcacccagcacgttgagagatcacctgccaata
gccttaatggctttatctgagctcaggggacaggctggatcaatgagtcaaggttcagca
tccagaccagcagcagatccagagaaacttcggaaaataaaagagagcttgctggaggag
gactctgatgaagatgaaggggatctgtgcaggatctgccagtctggagtgggcacactg
accaatcccctgctagagccatgtcagtgcactggcagcattcaatatgttcaccaggac
tgtctgaaacagtgggtacaagccaaaatcaaggcgggagcagagctttcggtcatcagg
acctgtgagctgtgtaaggagagcctgaagctggatatggatggcttcgatgtagaggac
tgttatcagaagcatcgcaatgcccggaatcaggaggatctgtcacacactggcatgtac
ctggtcctgctgttgcacctgtacgagcagagatttgctgagctgctaagactctcccac
agccgctatagtaactacaggcttgcaagagcccacccgctgcaacgatcaggagaaagt
gaaagaacaatacctgacgaagacggtcacagctctgagaatcaaatgcaggtcttgacc
catggaaacagctccccacgtagagacacctga
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