Polyodon spathula (Mississippi paddlefish): 121301833
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Entry
121301833 CDS
T07273
Name
(RefSeq) keratin, type I cytoskeletal 19-like
KO
K07604
type I keratin, acidic
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121301833
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121301833
04147 Exosome [BR:
pspa04147
]
121301833
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
121301833
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121301833
Exosomal proteins of other body fluids (saliva and urine)
121301833
Exosomal proteins of colorectal cancer cells
121301833
Exosomal proteins of melanoma cells
121301833
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF7310
FKBP15
TPR_MLP1_2
EzrA
CCDC39
Plectin_PPL
PUMA_CC
Baculo_PEP_C
pRN1_helical
Phage_scaffold
DUF1664
DUF4515
Motif
Other DBs
NCBI-GeneID:
121301833
NCBI-ProteinID:
XP_041087389
LinkDB
All DBs
Position
28:complement(2108456..2113673)
Genome browser
AA seq
469 aa
AA seq
DB search
MASVALATSGYSSWSSSSQNVSSRTQASSTRINSIKSSRLSMARKAPSMYGGAGGLATRI
SLSPISQISSAGSMGGYYQNRFTEGFVQVSGKQTMQNLNDRLATYLEKVHSLESANSHLE
LQIREFYNNRAPMADKDLTGYYLTISELRKQISDSSMHSTKLMLQIDNAKLAADDFRIKY
ENELEMRRSVEGDIVGLRKFLDDLTLKKTDLEMEIERLKEDIIHLKKSHQEDVQALRSQL
SSDVFVEVDSAPGVDLGKILSEIREQYESVVAKNLREVETWFKTQTEALSHQLTTKTTAI
QTSKTKISELNRTFHSLEIELQAVQSLYYNLETTVAETERRYGAELSQLQVIIDRLQSEL
MQVRMDTERQGNDYRMLLDIKTRLEMEITEYRRLLDGESSMVTKTQKVTQVDSSSSIKTS
KVTEEVCVSTVSKEVVVDPLVTRRVKIITQEVVDGVVMSEKLEEMEQQL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgttgcgctagccacaagtgggtacagctcctggagcagctctagccagaat
gtctctagccggacccaggctagctccaccaggatcaacagcatcaagtccagcaggctg
tcaatggctagaaaggcccccagcatgtacggcggggcaggagggcttgccactcgtatc
tccctctcccccatttcccagatctcctctgccggcagcatgggaggctactaccagaat
aggttcacagaggggtttgtccaagtcagtgggaagcagaccatgcagaacctcaatgat
cgtctggccacctacctggagaaggtccactccctggagtcagccaattcccaccttgag
ctgcagatccgggagttctataataaccgagctccaatggccgacaaggatctgactggc
tactacctgactatctctgagcttcgcaaacagattagcgattcatccatgcactccacc
aagctgatgctccagatcgacaacgccaaactggcagcggatgacttcaggatcaagtac
gagaacgagctggagatgaggcgctcggtcgaaggtgacatcgttgggcttcgcaagttc
ctggacgacctgaccctgaagaaaactgatctagagatggagattgagaggttgaaggag
gatatcatccacctcaagaagagccatcaggaagatgtgcaggccttgcgttcccagctg
tccagcgatgtttttgtggaggtggactctgctcctggggtggacctcgggaagatctta
agcgagattagagagcagtatgagagcgtagtggccaagaacttacgcgaggtggagact
tggttcaagactcagacggaggctttgagtcatcagcttacaaccaaaaccactgcgatt
cagacctccaagaccaagatctctgaactgaaccgcaccttccactctctggaaattgag
ttgcaggctgtgcaaagcttgtattacaacctggagaccactgtggcagagacagaacgc
cgctatggggcagagctgagtcagctgcaagtgatcattgacaggctgcagagtgaattg
atgcaggtccgaatggacacggagcgccagggcaatgattacaggatgctgctggacatc
aagacccgcctggagatggagatcacggagtacaggcgcctgctggacggggagtcgagc
atggtaaccaagacacagaaggtaacccaggttgactcatcctcaagtatcaaaaccagc
aaggtcacagaggaagtctgtgtttctactgtctctaaggaagttgtagtggaccccttg
gtgacacgcagggtgaagatcatcacccaggaggttgtggatggcgtggtcatgtcagag
aaactggaagagatggagcagcagttatag
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