Polyodon spathula (Mississippi paddlefish): 121301855
Help
Entry
121301855 CDS
T07273
Symbol
itga3b
Name
(RefSeq) integrin alpha-3b
KO
K06482
integrin alpha 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04510
Focal adhesion
pspa04512
ECM-receptor interaction
pspa04810
Regulation of actin cytoskeleton
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121301855 (itga3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121301855 (itga3b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121301855 (itga3b)
04810 Regulation of actin cytoskeleton
121301855 (itga3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121301855 (itga3b)
04515 Cell adhesion molecules [BR:
pspa04515
]
121301855 (itga3b)
04090 CD molecules [BR:
pspa04090
]
121301855 (itga3b)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121301855 (itga3b)
Cell adhesion molecules [BR:
pspa04515
]
Integrins
Integrin alpha subunits
121301855 (itga3b)
CD molecules [BR:
pspa04090
]
Proteins
121301855 (itga3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
FG-GAP_2
GP41
Fer4_22
Motif
Other DBs
NCBI-GeneID:
121301855
NCBI-ProteinID:
XP_041087447
LinkDB
All DBs
Position
28:complement(3720992..3761211)
Genome browser
AA seq
1052 aa
AA seq
DB search
MASDQTHLFSRDFCLFLLALYGGIQICLGFNIDTRFPVVKEGQTSGSFFGFSVALHKQTE
GATRYLLLTGAPKEKASPALKVNETGAVYYCPITTDTKDCTRVDLVKNVNPAQEMVEDMW
LGVTVASQGGANGGRVLACGHRYVKILMSGSEEQRRMIGKCFVRGNDLSYNPNDDWQSHH
YEVCNPANDMSSEGMCTMGMSGGMTETEVYIGTPGSFTWQGSVDVTWWNPKASWDLYERK
YPNTDNNNIYIGYSVQEEKNMLHADKYTVIAGAPRASHKGAVFLMDINTDVIGFNTMLSG
EQVGSYFGNSIAAADLNNDGWKDLLVGAPFYFDRKKEKGGAVYIFMNEGGVFQNTSTLVL
KGVSGSGFGFAVASVGDVNQDGFEDIAIGAPFDGSGKVFLYCSSKEGLSKEPKQVIDGNE
IGASGIKVFGYAINGGLDVDDNSYPDILVGSLDDKIALLRARPVIQLSKTFNVSPNIVDP
ANCTDDSCIKVKLCFSYILSNGNTTFQKNITLKYRLEADADRRSPRVKFLKPSSLSVYEG
YFSMPETKCQTIKLILTDNIQDKLHPIEFVLNYSIYEKTARRRRDIQSLDAYPVLSEEQT
HRDTQEIHFHKKCGADNRCRSNLQMTAAFASFAPEEQLPSKAGKQVLQYSPDVKKLLLVV
NVTNLRTNTREAEDAHQAILNITLPTALQYSGVRSDNNIECHAEETVICELGNPFKSEQE
ETIRLIFEASGITLNTQQIEAELQLSTQSEQDDLNPVPVVLQIQYSVQASFSVDNGRQLT
YFSGSVMGESAMKKAEDVGSPVEYTFNVAVKGEPLGSMATLAVVFDWPYEVANGKWLLYL
TEIVTKGTAESHCVPKGDIVNPLNLTLPSRGSNRRRREADLPQGLEAGSTLPTSKKGKIT
VTLDCSQKTANCITFSCPLLNMTNKATVIVRARVWNSTLLEDYSEVGRVTVKAKATLKLD
TKKPTIKMTETTHPIILEVDSEILEETPGDIALWIIIVAVVAGILLLGLIILLLWKCGFF
KRASRREMYEAKGQKAEMKIQPSETERLTEDY
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgatcagacgcacttgttctcacgggatttttgcctttttctattagcctta
tacggtgggattcaaatctgccttggatttaacatagatacgcgattcccggtggtgaaa
gaagggcagacgagcgggagcttctttgggttttccgtcgcactgcacaaacagacggag
ggtgctaccagatacctgcttttaactggagccccaaaggagaaagcatccccagcgctc
aaggtcaatgaaactggagcggtttattattgtcccatcaccacagacaccaaggactgc
acccgtgttgacctggttaagaatgtcaatcccgctcaggaaatggtggaggacatgtgg
ctgggagtcactgtggccagtcaaggaggtgccaatggggggagagtgttggcttgcgga
caccgctacgtgaagatcttgatgtctggctctgaggagcagaggcgcatgattgggaag
tgctttgtgagagggaacgatctgagctacaaccccaatgatgattggcagtcacatcac
tatgaggtgtgcaaccctgccaatgacatgagcagtgaaggcatgtgcaccatgggcatg
tcaggaggcatgacggagacggaagtatacatcggcactccggggagcttcacatggcaa
ggaagtgttgacgtgacctggtggaaccctaaagcatcctgggatctgtacgaaagaaag
tatcctaacacggacaacaataacatctatatcggatattcagtacaagaggaaaagaac
atgctacacgctgataagtacaccgttatagctggtgctcctcgagcttcccacaagggg
gcagtctttctgatggatatcaacacggacgtcattgggttcaacacgatgctgtccgga
gaacaagtgggctcgtatttcggaaacagtattgcagcagcagatctgaacaatgatggc
tggaaggacctgctcgtcggagctccattctatttcgaccggaagaaggaaaaaggagga
gccgtttacatattcatgaacgagggcggggttttccagaacacctccactctggtcctg
aagggagtcagcggctcagggtttgggtttgccgttgccagcgtgggagacgttaaccag
gatggctttgaagacattgccatcggtgctccctttgatggatctggcaaggtgttcctt
tactgcagcagcaaagagggactttccaaagaacccaaacaggtgattgacggcaatgag
attggcgctagcggcatcaaggtgtttggatacgccatcaacggcggcctagatgttgat
gataattcttacccagatatccttgtgggcagcttggatgataagattgcactactcaga
gctcgtccagttatccagctctccaaaacattcaatgtgagcccaaatatcgtggatcct
gccaactgcactgatgactcctgtattaaggtgaagctgtgtttctcctatattctcagc
aacggaaacacaacatttcaaaagaacatcactcttaagtacaggctagaagcagacgca
gaccgccgctctcctcgtgtgaagtttctcaagccaagttctctatcagtctatgagggc
tacttctccatgccagagaccaaatgtcagactatcaagctcatactgacagataacatt
caagacaagctgcacccaattgagtttgtgctgaactattccatctatgagaagacggca
aggaggcgcagggacattcagagcttggatgcctacccagtgttaagtgaagagcaaacc
caccgagacacacaagagattcacttccataagaaatgtggagcagacaacaggtgcaga
agtaacctacagatgactgcagccttcgcctcctttgcccccgaagaacaactgcccagc
aaggctgggaagcaagtcctgcagtacagccctgatgtgaagaagctccttctcgttgtg
aacgtgaccaatctgcgcactaacactcgtgaagctgaggacgcccaccaagccatcctc
aacattaccctccctacggcgctgcagtattcgggggtccgatcggataacaacattgag
tgtcatgctgaagagacggtgatctgtgaactaggaaacccattcaaaagcgaacaagag
gaaacaatccggctcatttttgaagcctctggaatcaccctcaacacacaacagattgaa
gccgagctccagctctccacgcagagtgaacaggatgacctgaatccagtgcctgtcgta
ttgcaaatacagtactcagtgcaagcctccttctctgtggacaatggaagacagctaacc
tatttcagtgggtcagtgatgggtgaatcagccatgaaaaaagcagaagatgtgggaagc
ccagtggagtacacatttaatgttgcagtaaaaggggagcccctgggcagtatggctacc
ttagcagtggtgtttgattggccctatgaagtcgccaatggcaagtggctactgtacttg
actgagattgtgacaaagggaacggcagagagccactgtgttccaaaaggagacattgtc
aatcctctcaatcttacactgcctagtcgaggatcaaacaggagaaggcgggaggctgac
ttgcctcagggcctggaggctggatcaactctgccgacgtcaaagaagggaaaaataacc
gtgactctggattgttctcaaaaaacagcaaactgcatcactttcagctgccctcttctc
aacatgaccaataaggccactgtgatcgtccgcgcacgagtgtggaacagcacactgctg
gaggattactcggaagtaggccgtgtgacagtgaaggccaaagcaacgctgaaattggac
accaagaaaccaacaatcaaaatgacagagacaacacatccgatcatcctggaagtggac
tctgaaatcctagaggagactcctggagatattgcactgtggattatcattgtggctgtg
gtggcaggaattctgctactggggttaatcatactgctgctgtggaagtgtggcttcttc
aagcgggccagcaggagggaaatgtacgaggccaagggtcagaaagcggagatgaagatc
cagccctctgagacagagaggctgaccgaggactactga
DBGET
integrated database retrieval system
