KEGG   Polyodon spathula (Mississippi paddlefish): 121301871
Entry
121301871         CDS       T07273                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03266  Virion - Herpesvirus
pspa04081  Hormone signaling
pspa04145  Phagosome
pspa04148  Efferocytosis
pspa04510  Focal adhesion
pspa04512  ECM-receptor interaction
pspa04810  Regulation of actin cytoskeleton
pspa04820  Cytoskeleton in muscle cells
pspa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    121301871
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    121301871
   04512 ECM-receptor interaction
    121301871
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121301871
   04148 Efferocytosis
    121301871
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121301871
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121301871
   04810 Regulation of actin cytoskeleton
    121301871
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    121301871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pspa04131]
    121301871
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pspa04147]
    121301871
   04515 Cell adhesion molecules [BR:pspa04515]
    121301871
   04090 CD molecules [BR:pspa04090]
    121301871
Membrane trafficking [BR:pspa04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    121301871
Exosome [BR:pspa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121301871
Cell adhesion molecules [BR:pspa04515]
 Integrins
  Integrin beta subunits
   121301871
CD molecules [BR:pspa04090]
 Proteins
  121301871
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt I-EGF_1 EGF_integrin EGF_2 EGF_Teneurin vWA_SIBA-E EGF_TEN
Other DBs
NCBI-GeneID: 121301871
NCBI-ProteinID: XP_041087482
LinkDB
Position
28:complement(6090689..6131062)
AA seq 675 aa
MNLRPDDSQKFTVQVRQVEDYPVDLYYLMDLSYSMKDDLQKLRTLGNDLATAMGKLTSNL
RMGFGAFVDKPLSPYMFISPQAAIDNPCIGIQMTCMPQFGYRHVLTLTDQVSRFNEEVKK
QDVSRNRDAPEGGFDAIIQAAVCKEKIGWRQGASHLLVFTTDAKTHVALDGRLAGIVQPN
DGKCHVGEDNNYAGSTTLDYPSLALLTEKMSENNINLIFAVTNPVEELYRNYSELIPGTT
VGILSHDSGNVIQLIVDAYAKIRSKVELELLDLPDELSLSFNATCTNGEIIPGQKSCSGL
KIGDTVTFSVEARARGCPKEKNRTFTIKPVGFKDSLQITVNFECDCNCQALAVPASPLCN
NGNGTYECGICQCLPGRLGPRCECSEGDYNPSQQDKCSPKANSSICSGHGECICGQCVCH
NTDFGKYWGKFCECDDFNCVSYKSKLCSGHGKCSCGDCLCDPDWKGDYCNCSTRTDTCMS
SIGLLCSSRGQCVCGTCECTQPGAYGDTCEKCPTCPDVCTFKKDCVECRNFQRGKLNDDK
TCARICRDEIILVKDLGLHDKNAMNCTYKDEDDCVVRFQYYEDASGTSVLYVVEERECPK
GPDILVVLLSVAGAILLIGLAALLIWKLLITIHDRREFAKFEEERAHAKWDTANNPLYKG
ATSTFTNVTYRGNAE
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgaacctgcgacctgatgactctcagaagttcacggtccaggtgcggcaggtggaggac
tatcccgtggatctctactacctgatggatctgtcctactccatgaaggatgacctgcag
aaactccgcactctgggcaatgatctggccaccgccatgggcaaactcaccagcaacctg
cgcatgggctttggggcctttgtggacaagccactctccccatacatgttcatttctccc
caggctgccatagacaacccctgcataggcattcagatgacatgtatgccccagttcggc
tacaggcatgttctgactctgacggatcaggtgagccggttcaatgaggaggtgaagaag
caggatgtctctcgaaacagagacgctcctgaggggggatttgacgccatcatccaggct
gctgtctgcaaggagaagatcggctggcgtcagggtgcttctcatctcttggtgttcacc
actgatgccaagacccacgtggctctggacggcagactggcaggcatagtgcagcctaac
gatgggaagtgccacgtcggggaagacaataactatgcagggtccaccactctggattat
ccatcactggccctgctgacggagaagatgtctgaaaataacatcaacctaatctttgct
gtcacaaaccctgtggaggaactctaccggaattacagtgagctgatccccggaaccaca
gtggggatcctatcacatgattcagggaatgtcatccagctcattgtggatgcctatgct
aaaatccgttcgaaggtagagttggaactcctggatctccctgatgagctgtccctgtcc
ttcaatgccacctgcacaaacggagagatcattcccgggcagaagtcctgctctgggctg
aagatcggagacacagtgaccttcagtgtggaggcccgcgccagaggctgccccaaggaa
aaaaacaggaccttcaccatcaaaccagtgggcttcaaagactctctgcagatcacagtg
aacttcgagtgcgattgcaactgccaggccctggccgtgcccgctagcccgctctgcaat
aacggcaatggaacgtatgagtgcgggatatgccagtgcctgccagggcgcttgggccca
cgatgcgagtgctctgagggagactacaaccccagccagcaggataagtgcagccccaag
gctaacagttccatctgcagcgggcacggcgagtgtatctgtggccagtgcgtgtgccac
aacaccgacttcgggaagtactggggcaagttttgcgagtgtgatgacttcaactgtgtg
agctacaagagcaagctctgttcaggccatgggaagtgcagctgtggagactgcctgtgt
gatccagactggaagggggattactgtaactgctcaacacgcacagacacctgcatgtcc
agcattgggctgctgtgcagctccaggggacagtgtgtctgtgggacgtgtgagtgcacc
cagcccggcgcctacggggacacctgcgagaaatgccctacctgtcccgatgtctgcacc
ttcaagaaggattgtgtggaatgcagaaatttccagaggggcaaactcaatgatgacaag
acttgcgcacgaatctgcagagatgaaatcatactggtgaaagaccttggtttgcatgat
aagaatgctatgaattgtacctacaaagacgaagatgactgtgtggtgaggttccagtac
tatgaggatgccagtggaacatcagtcctctatgtggtcgaggaacgagaatgcccgaag
ggtcctgacatcctggtggtcctgttatcggtggcgggcgctatcctgctcatcggcctg
gctgccctgctaatctggaagctgctcatcaccattcacgaccgccgcgagtttgccaag
tttgaggaggagcgtgcccacgccaagtgggacacggctaataatcccctgtacaaagga
gcaacctccaccttcacgaatgtgacgtaccgtggaaatgcagagtga

DBGET integrated database retrieval system