Polyodon spathula (Mississippi paddlefish): 121301883
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Entry
121301883 CDS
T07273
Name
(RefSeq) ankyrin repeat and SOCS box protein 16-like
KO
K10338
ankyrin repeat and SOCS box protein 16
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121301883
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121301883
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
SOCS_box
Motif
Other DBs
NCBI-GeneID:
121301883
NCBI-ProteinID:
XP_041087506
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Position
28:6947452..6954012
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AA seq
457 aa
AA seq
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MSRRDTFVFTSTTLRALRHQQDMLDWETERRALARRRLLLPKARKTITPRPQPDRESKYC
RDAVIHNALFTGDRDKIKSIFNDEATSNMIIETLNDELVWSPEMGLWALTPKPKYTSALR
ITAGRGYAACAKLLLHNGADVNATPGGLSALHDACAGGFTDCAQLLLSYGANPNILSEEG
SAPLHLCTTPKTFLCAKLLLEFGANINIMTRDTQMSPLHVAAQHGLEEHLSLYLCRGAHV
CSRNREGETALNVACASADKPAEGGRYYRVVQKLLSSGADVRVAGRKNHTPLHNACANCS
YRIVDLLLQHGAAVNQRNCAGYTPMDCVLQGVEDYLDWQPEGIVLSLLNHGALPINPKML
KLCSLSPRTMEVILNSYEHIPLCNSWVESVPPEVWQEHHSFYSSVVQMTNQPRSLQHLAR
CAIRRYLDGHSHSAITQLQIPHSLQEYLLLKIEGSIK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcgggatacattcgtgttcacctccaccacgctgagggccctgaggcatcag
caggacatgctggactgggagaccgagcggcgggccctggccaggcggaggctccttctc
cccaaagccaggaagaccatcaccccccggccgcaaccagaccgggagtctaaatactgc
cgcgacgctgtcatccacaacgctctcttcacgggggaccgcgacaaaatcaagagcatc
ttcaatgacgaggccacgtcaaacatgattatagaaacgctcaacgatgaacttgtctgg
tcaccagaaatggggctttgggccttgacccccaagccaaagtacacatctgcgttgcgc
atcaccgctggcaggggttacgctgcctgtgccaagctgctgctgcacaacggggctgat
gtgaatgccacccctggagggctcagcgcccttcatgatgcctgtgccggtggcttcacc
gactgcgcccagctgctcctcagctacggagccaatccaaacatcctctccgaagagggg
agcgctcccctgcacctctgcaccacccccaagaccttcctgtgtgccaaactgctcctg
gagttcggtgctaacattaacatcatgaccagagacacccagatgagccctctgcatgtg
gcagcgcagcacgggctagaggagcacctcagcctgtacctgtgcagaggagcccacgtg
tgcagccgcaatcgcgagggcgagactgccctcaacgtagcctgcgccagcgccgacaag
cccgcggagggtgggcggtactaccgtgtggtgcagaagctgctctccagcggggcggac
gtaagagtggcaggcaggaagaaccacaccccgctgcacaacgcctgcgccaactgcagc
taccgcattgtggatctgctgctccagcatggggcggctgtcaaccagcggaactgcgca
ggatacacgccaatggattgcgtcttacagggggtggaggactacttggattggcaaccg
gagggcattgtgctgtccttactcaatcacggcgctttacccatcaatcccaagatgctc
aaactgtgctcactatcccccagaaccatggaagtgatcctgaactcgtatgagcacatc
ccactgtgtaattcctgggtggagtccgtccctcctgaggtttggcaggagcaccactcg
ttctacagctctgtggtgcaaatgaccaaccagcctcgatcactgcagcacctggcacgc
tgtgccatacgcaggtaccttgacgggcacagccactccgccatcacccagctgcagatc
cctcattccctccaggagtacctgctgctcaagattgaaggctccatcaaataa
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