Polyodon spathula (Mississippi paddlefish): 121301889
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Entry
121301889 CDS
T07273
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121301889
04147 Exosome [BR:
pspa04147
]
121301889
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
121301889
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121301889
Exosomal proteins of other body fluids (saliva and urine)
121301889
Exosomal proteins of colorectal cancer cells
121301889
Exosomal proteins of melanoma cells
121301889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
TEX12
Fez1
Keratin_2_head
Motif
Other DBs
NCBI-GeneID:
121301889
NCBI-ProteinID:
XP_041087519
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All DBs
Position
28:complement(2023543..2027512)
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AA seq
453 aa
AA seq
DB search
MSIRNYSSQKIASSSTSSAMGSQVFVRRAQSVYGGAGGSGARISYSTSSGGGGGFGYGYG
LSLGGGGGAGFGGGAGFGGGGDFGLSFNEKATMINLNDRLAAYLEKVRTLETSNATLERQ
IREWSQNRLVISHDYSAYWKTITDLRDKIGAASMTNARIILQIDNAKLATDDFRVKYENE
LAMRQSVEADIAGLRRVLDELTLTRSSLEMEIEGLKEELIYLKKNHEEALLAFRSQVGGS
VNVEVDAAPQQDMSRVLDEMRAQYEGIVEKNRRDVEAWYKNKFDELNKQVATSTEVLQTS
KTEISEHRRTIQGLEIELQSQLSMKSALEGTLSETEGRYGAQLSHLQTIINRLEAEVMQV
RIDMERQGNEYKMLLDIKTRLEMEIAEYRRLLDGEDSGKGYNLQKAQTVVKTVEEVKVKA
PVVTKTRMVKTMIVEEVDGVVVNTREEMVEEPM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcagaaactactcctctcaaaagattgccagttcgagcacctcgtctgccatg
ggcagccaggtgtttgttcgacgtgcacagagtgtgtacggaggtgctggtggctctggt
gcccgtatctcctattccacatctagtggtggtggtggtggatttggctatggatatggc
ctgtccctggggggtggtggcggtgctggttttggtggcggtgctggttttggtggcggc
ggagattttggtctctccttcaacgagaaggccaccatgataaacctcaatgaccgcctg
gccgcctacctggagaaggtgcgcaccctggagacctccaacgccaccctggagaggcag
atccgtgagtggagccagaaccgcttagttatcagccatgactacagtgcctactggaag
accatcactgacctccgggacaagattggtgcagcaagcatgaccaatgccaggattatt
ctccagattgacaatgccaaattggcaaccgatgactttagagtcaagtatgagaacgag
ctggcaatgaggcagtctgttgaagctgacatcgctggactgaggagggtcctggacgag
ctgactctgaccagatcctccctggagatggagatcgagggtctgaaggaggagctgatc
tacctcaagaagaatcacgaggaggcactcctggcctttcgttcacaggtgggcgggtcg
gtcaatgtggaggtggacgctgccccacagcaggacatgtccagagtcctggacgagatg
agagcgcagtacgagggcatcgttgaaaagaaccggcgggatgtggaggcttggtacaag
aacaagtttgacgagctcaacaagcaagtggccaccagcacagaagttctccagacatcc
aagaccgagatctcagaacatcggaggaccatccagggactggagattgaactgcagtct
cagctcagcatgaaatctgcgctggaaggcactctgtcagaaacagagggccgctacggg
gcacagttgagccatctgcaaacgatcatcaacaggctggaggctgaagtgatgcaggtc
cgaatagacatggagcgccagggcaatgagtacaagatgctgctggacatcaagacccgc
ctggagatggagatcgcagagtacaggcgcctgctggacggggaggattcagggaaaggt
tacaatttgcagaaggctcagactgtggtgaaaacagtagaggaagtgaaagtcaaagca
cctgttgttaccaagaccaggatggtaaagaccatgatagtggaggaggttgacggcgtg
gtggtcaataccagagaggagatggttgaggagcccatgtaa
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