Polyodon spathula (Mississippi paddlefish): 121301890
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Entry
121301890 CDS
T07273
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121301890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121301890
04147 Exosome [BR:
pspa04147
]
121301890
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
121301890
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121301890
Exosomal proteins of other body fluids (saliva and urine)
121301890
Exosomal proteins of colorectal cancer cells
121301890
Exosomal proteins of melanoma cells
121301890
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Rod_CreS
Phage_scaffold
ADIP
Motif
Other DBs
NCBI-GeneID:
121301890
NCBI-ProteinID:
XP_041087520
LinkDB
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Position
28:complement(2031423..2036076)
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AA seq
440 aa
AA seq
DB search
MSYSSSSSVSSGGHFKASQAGSGHSVIKRRAPSVYGGAGGHGTRISSHSMSGGFGGYGGV
FAMGGGGGGWSFGTEHGFSINEKSTMQNLNDRLASYLEKVRSLEAANSKLEFQIREFMKN
RTPQSHDYSAYEKIIHDLQHQINAARLVNSKIILQIDNAKLAAEDFHVKYEAELVMRQSV
EADIARLRSVLDQLTLARCNLESDLERLKEELIYLKKNHQEDLAALRAQMHSTSVNVEVD
AAPHQDLSRVLEETRAQYEGIAEKNHREIEAWYKSKFDTLNQQVTMNTAELEANKNKIID
LRRVLQGLEIELQSQLGMKAALESSLRETEANYSNQLHRLQGKVSILEAELMQLRLDIEH
QSQEYRILLDIKTRLEMEIAEYRRLLDGEGGRKSYEIIKTHPPIEPKHEPVKTRKVKTIV
EERVNGKLVSTQVQEEEEKM
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactccagctctagctcagtcagttccgggggccacttcaaggcatcccaagca
gggtctggacactctgtcatcaagcgtcgggctcctagtgtttacggcggcgctggagga
catggcaccagaatctcgagccactccatgtcgggcggttttggaggttatggtggagtc
tttgccatgggaggaggaggaggaggatggtccttcggtaccgaacatggtttctccatc
aacgagaagtccaccatgcagaacctcaatgaccgtctggcctcctacctggagaaggtg
cgctccctggaggcagccaattccaagctggagttccagatccgggaattcatgaaaaat
aggacaccgcagagccacgattatagtgcctatgagaagatcatccatgaccttcagcat
cagatcaatgctgctcgtcttgtaaattccaagattatcctgcaaattgacaacgcaaaa
ctggctgccgaagactttcatgtaaagtatgaggctgagctggtaatgaggcagtctgtc
gaggctgacatcgccaggctgaggagtgttctggatcagctgactctggccagatgcaac
ctggagtcagatctggagcgtctgaaggaggagctgatctacctcaagaagaaccaccag
gaggatctggcagctcttcgggctcagatgcacagcacatcggtcaacgtggaggtggac
gctgctccacaccaggacctgtccagagtcctggaagaaacaagagcgcagtacgagggc
atcgctgaaaagaaccaccgggagattgaagcctggtacaagagcaagtttgacactctg
aaccagcaggtcaccatgaacaccgccgagcttgaggccaacaagaataagattatcgac
ctgagacgagtgctgcagggcctggagattgaactgcagtctcagcttggcatgaaagcg
gccctggagtcctcattgcgggagacagaggccaactactccaatcagctccacagactg
caggggaaggtcagcatcctggaggctgagctcatgcagctgcgcttggacatcgaacac
cagtcccaggaataccggatcctgctggacatcaagacccgtctggagatggagatcgcg
gagtacaggcgtctgctggacggggaggggggcaggaaaagctatgaaataatcaagacc
cacccaccaattgaacctaaacacgagccagtgaaaaccaggaaggtgaagaccattgtg
gaagaacgagtcaatggaaaacttgtgtctactcaagtccaggaggaggaagagaagatg
taa
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