Polyodon spathula (Mississippi paddlefish): 121301924
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Entry
121301924 CDS
T07273
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8
KO
K12188
ESCRT-II complex subunit VPS22
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121301924 (snf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121301924 (snf8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121301924 (snf8)
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
121301924 (snf8)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121301924 (snf8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
AbiEi_4
DotZ
CDK5RAP3
DUF4896
Motif
Other DBs
NCBI-GeneID:
121301924
NCBI-ProteinID:
XP_041087580
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All DBs
Position
28:1132740..1138161
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AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLETFKTHLEEFASKHKQEIRK
SAQFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LEELHQRVLKGRGKFAQDVSQDDLIRAIKKLKAMGNGFGIIPVGGTYLVQSVPAELNMDH
TVVLQLAEKKGFVTVSEIKSSLKWETERTCHVLDDLLKEGLAWLDGQAAGEPQYWLPALF
SELYSQDVTPEEASEMVP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggagaggtgttggtgccggggcgattgcgaagaagaagcttgccgaggcgaaa
tataaagaaagggggacagttcttgcagaagatcagctcgcacagatgtcgaagcagctg
gagacctttaagacgcacctggaggagtttgcaagcaaacacaagcaggagatccggaag
agcgcccagttcagagtgcagttccaggacatgtgtgccaccattggggtcgatccgctg
gcttctgggaagggcttctggtcggagatgctgggagtgggagatttctactatgagctg
ggagttcagatcattgaggtgtgcctggcgctcaagcacaggaacggagggctgatcact
ttggaggaactccaccagagggtgctaaagggacgtggcaagttcgctcaggacgtcagt
caggatgatctgattcgggccatcaagaagctcaaggcgatggggaacggcttcgggata
atcccagtgggcggaacctacctcgtccagtccgtcccggcagaactaaacatggaccac
actgttgtcctgcagctcgctgagaagaaaggcttcgtgacggtgagcgagatcaagtcc
agtctgaagtgggagactgagcggacctgccatgtgctggatgacctgctgaaggagggt
ctggcttggctggacggccaagccgcgggggagccccagtactggctaccggccctgttc
tctgagctctactcccaggacgtgacccccgaggaggccagcgagatggtgccctga
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