Polyodon spathula (Mississippi paddlefish): 121301959
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Entry
121301959 CDS
T07273
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X1
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00512
Mucin type O-glycan biosynthesis
pspa00514
Other types of O-glycan biosynthesis
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
121301959
00514 Other types of O-glycan biosynthesis
121301959
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121301959
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
121301959
Glycosyltransferases [BR:
pspa01003
]
Glycan extension
Type 3 chain
121301959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
121301959
NCBI-ProteinID:
XP_041087634
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All DBs
Position
28:complement(9060169..9072403)
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AA seq
331 aa
AA seq
DB search
MQLHCLKMLSRSMVSMFMFACGGVMGCLLFYYAVGKVRLQMAQPRKLYSSRHQHNLQYHQ
SLRNTTADPSDSGVRILCWVMTSPQSLQSKALHVQTTWGRRCDKLLFMSSVSDPSFPALG
LNTSEGRSQLYRKTMAAFTLLHDRYLQHADWFLKADDDSYVVIENLRRLLSSRNPRYPVY
LGRRFSPYLKQGYMSGGAGYVLSREALQRYVGALRDGTCTHTSSVEDLALGRCLEKVGVP
AGDSRDQLHRESFHPFLPDHLLIPGSLPASHWYWSYNYYNTPNGPNCCSDLSISFHYVDP
VYMHMLEYFTYHLRAVGYQHRDNTDFSVPAH
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgcattgtttgaagatgctgtctcggtcaatggtgtccatgttcatgtttgcc
tgcgggggtgtgatggggtgcttgctgttttattatgctgttggcaaggtgaggctgcag
atggcacagccgaggaagctgtactcttccagacaccaacacaaccttcagtatcaccag
tcattgagaaacaccactgcagacccctctgattccggagtgcgaatcctctgctgggtg
atgacctcgccgcagtccctccaatccaaggcgctgcacgtccagaccacctgggggcgc
cgctgcgacaagctcctcttcatgagctctgtgtccgacccctcgttccctgccctgggc
ctgaacacctcggaggggcgcagccagctctaccgcaagaccatggctgccttcaccctg
ctgcatgaccgctacctgcagcacgcagactggttcctcaaggctgacgatgacagctac
gtggtgattgagaacctgcggcggctgctgtccagtcgaaacccccggtacccggtatac
ctgggccggcgcttcagcccctatctcaagcagggctacatgagcggaggggcgggttac
gtgctgagcagggaggccctgcagcgctatgtaggggccctccgggacggcacctgcacc
cacacctcctctgtggaggacctggctctggggaggtgtctggagaaggtgggggtccca
gcaggagactcccgagaccagctgcacagggagagcttccaccccttcctcccagaccat
ctgctcatcccgggctccctgccggccagccactggtactggagttacaactactacaac
actcccaacgggccgaactgttgctccgacctctccatctccttccactatgtggacccc
gtctatatgcacatgctggagtatttcacctaccacctccgagctgtcggctaccagcac
agagacaacactgacttctcagtgccagctcactga
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