Polyodon spathula (Mississippi paddlefish): 121301989
Help
Entry
121301989 CDS
T07273
Name
(RefSeq) contactin-associated protein-like 5
KO
K24337
contactin associated protein-like 3/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121301989
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
121301989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
F5_F8_type_C_2
EGF
Laminin_G_3
MAP17
Motif
Other DBs
NCBI-GeneID:
121301989
NCBI-ProteinID:
XP_041087688
LinkDB
All DBs
Position
2:81267437..81397451
Genome browser
AA seq
1310 aa
AA seq
DB search
MDFVLKPVFGMLTFLFVSLSICLILAENNRNCDDPLVSTLPQTSFNSSSQLSDSHSPGFA
KLNRRDGAGGWSPLDSNKYQWLEIDLGARTEITGVATQGRYGSSDWVTSYLLMFSDTGRN
WKQYRQEESIWAFSGNTNADSVVQYKLQQHVIARFLRFVPLDWNANGRIGMRVEIYGCLY
KSDVAGFDGSSSLFYRFSQKSMETTRDAISMKFKTMQNTGVILHGEGQHGDCITLELHKG
TLFLHMNLDSAKGLSSDNHALVTLGSLLDDQHWHSVLIERVNKHINFTVDKNTQQFQIKG
QFDPLNIDYELSFGGIPVPGKPGTSLKKSFQGCLENVFFNGANIIDLAKRQKPEIRIVGN
VTFSCSEPSNVPVTFVSPTSYLLLPGSLQKDSISVKFQFRTWNTAGLLLTSELYQGSGVL
WLYLIDGKVKLSISKSGRNLVDVTTGTTLNDGQWHSIELSARRNRFSVTLDNDASAAAHA
SSPFYIFSGGQYYFGGCPEIISNQGCNNPFNVFQGCMRLISIDKQDVNLIQVQQRITGNF
SDLHIDLCGITDRCSPNYCEHGGKCSQSWNTFFCNCTNTGYTGATCHSSIYEQSCEAYKH
KGNASGFYHIDLDGSGLQRPLLVYCNMTDKTWTVLQHNNTQLTKVRGSSGLSQHAVYFNY
TANMEQLQAMINQAEYCEQELAYHCKKSRLLNTPEGTPFTWWVGRTNELQTYWGGAVPGR
HTCACGLKENCIDTKHFCNCDSDRNEWTNDSGLLTFKEHLPVTKIVIGDINRAISEAAYK
VGLLQCNDDKNFWNAAYFNTENSYLHFPTFHGELSADISFLFKTTASSGVFLENLGIKDF
IRIELKSPSEVTLSYDVGNGPFDVIVKTPTRLNDNRWHYVKAERNVKEASLQVDQLPRRI
QKAPADGHIHLQLNSQLFIGGTASRQKGFLGCIRSLQLNGVTLDLEERAKITPGVKAGCP
GHCSSYGSLCHNKGKCIEKYNGFSCDCSYSAFSGPFCKKEVAAYFKSGTSVMYTFKEPYE
INKNLSAQSSSIYSDVTLRSENIYFSFRTTQTPSLLLYVSSYYKEYLAVTLNKNGHLQIK
YKLHNNKSPEMFRVNFRNLANGHPHEVKIDREGDSLSVQIDQHPREEFSLSSDFEFNAIK
SIILGKIFESSDLDQDISRVNSLGFSGCLSSVQFNHIAPLKAALLYPDSAPVTVKGQLFE
SHCGASSEADPSSIERTHSLSDHSGPLDEGEPIVNAIRSDSALIGGVIAVIIFVILCVVA
VMARFLCQRKETYRNREAKGQQHDDNSGLALKNELNSQNTLSENQREYFI
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggattttgttctcaaaccagtgttcggaatgcttacattcctcttcgtctcactaagt
atttgcctgattctggcagaaaataatcgtaattgtgacgatccactggtatctacattg
ccccagacatcattcaatagttcatcacagctgtctgatagtcacagtcctggctttgct
aagcttaacagacgggatggagcaggaggttggtccccattggattctaacaaatatcaa
tggctagaaattgatcttggagcgagaactgagataactggtgttgccactcaagggaga
tatgggagttcagactgggtcacaagttatctcctaatgtttagtgacaccgggaggaac
tggaagcaataccgccaagaagaaagcatttgggccttttcaggaaatacaaatgcagac
agcgttgtgcaatataaactgcagcagcatgttatagcaaggtttctgcgatttgttcca
cttgactggaatgcaaatggaaggataggcatgagagtggagatttatggatgcttatac
aagtctgatgtagcaggtttcgatggcagcagctcattattctacaggttcagtcaaaag
tcaatggaaacaaccagagatgcaatttcaatgaagttcaagactatgcagaatacaggg
gttattttacatggtgaaggacagcatggggactgcattacattggagttgcacaaagga
acactctttctacacatgaatttagacagcgctaagggactttcttctgacaatcatgcc
ttggtgactctgggcagccttcttgatgatcagcattggcacagtgtacttattgaacga
gttaacaagcacatcaatttcactgtggataaaaacacacaacagttccaaattaaagga
caatttgaccccctgaatattgactatgagctcagctttggaggtatcccagttccaggg
aaaccagggacctctttgaagaagagcttccaagggtgcctggaaaatgtattcttcaat
ggagcaaacattattgatctggctaaaagacaaaaacctgagattcgtattgtgggtaat
gtgaccttttcctgctcagagccatcgaatgttccagtcacctttgtgagccctacgagt
tacttacttttgcctggatccctgcagaaagacagcatatctgtcaagttccagttccgt
acgtggaacacagctggtttgttgctaaccagcgaattgtatcagggttccggagtcttg
tggctttacctcattgatggaaaagtaaaactgtcaatttccaaatctggaaggaacctt
gtcgatgttactacaggaaccacgctgaatgatggacagtggcattctattgaacttagt
gctagaaggaatcgtttcagcgtaactttggacaatgatgcctctgcagcagctcatgcc
agctcgccattttatattttttctggaggacaatattattttggtggttgtcctgaaatc
atcagtaatcaaggatgcaataatcccttcaatgtttttcaaggatgcatgagacttata
tctatagacaagcaggatgtgaatctcatccaggtgcaacaaagaatcacagggaatttc
agtgacttgcacatagacttgtgtggtattacagacagatgctctccaaactattgtgaa
catggtggcaaatgttctcagtcctggaatacattcttttgtaactgtacaaatactggt
tacactggagccacatgccatagctcaatttatgaacaatcatgtgaggcatacaagcac
aaaggaaacgcatcaggcttttaccacattgatttagatggaagtggactacagagacca
ctgctagtgtactgcaacatgacagataaaacatggactgtgctacaacataataacaca
caactgactaaagtgagaggctccagtgggctcagtcagcacgcagtttattttaactac
acagccaacatggaacaactccaggctatgattaaccaagcagagtactgcgaacaggag
ctagcctaccactgtaaaaagtcacgtcttttaaacacacctgaaggaacgccattcact
tggtgggttggaagaacaaatgaattgcaaacatactggggaggtgcagtacctgggagg
cacacatgtgcttgtggcctgaaggaaaattgcattgatacaaaacatttctgtaattgt
gattctgacagaaatgaatggaccaatgattcaggtcttctgaccttcaaagaacatttg
cctgttactaaaattgtaattggcgacataaacagagccatttcagaagctgcttataaa
gttggacttctgcagtgcaatgacgacaagaacttttggaatgcagcctacttcaataca
gaaaactcctaccttcacttcccaacattccacggtgaactaagtgcagacatatcattc
ttattcaaaaccacagcttcatctggtgtgtttctggaaaatcttgggattaaagatttt
attaggattgaactcaaatctccttcagaagtaactctttcgtatgacgtgggaaatggt
ccctttgatgtaattgtgaagacaccgacacgtttaaatgacaaccggtggcattatgtg
aaggctgagcggaatgtaaaagaagcttcacttcaagtggatcaacttccaagaaggatt
cagaaagctcctgctgatggacacattcacctacaactcaacagccagttatttatagga
ggcactgcttcgaggcaaaaaggatttcttggatgtatccgttcattgcagttaaatgga
gtaacacttgaccttgaagagagagccaagattacccctggtgtgaaagctggttgtcca
ggacattgcagcagctatggtagtctttgtcacaacaaaggaaaatgcattgaaaaatac
aatggcttctcatgtgattgtagctactcagctttctcagggccattttgcaagaaagag
gtcgctgcatacttcaagagtggaacatctgtgatgtatacatttaaggagccctatgag
attaataaaaatttaagtgctcagtcatcttccatttactccgatgtaactcttagaagt
gagaatatttattttagcttccgcacaactcagacaccaagcttactattatatgtaagc
tcctattacaaggaatatctggcagttacactgaataaaaatggccatttacaaatcaag
tataagcttcataataacaaaagtccagaaatgttcagggtaaatttccgaaacctggca
aatggacaccctcacgaagttaaaattgatagggaaggagacagtctttctgtacagatt
gaccagcatcccagagaagaatttagtctatcatctgattttgagtttaatgccatcaaa
tctatcatccttggaaaaatctttgaaagcagtgacctggaccaagatatttcaagggtt
aactcccttggattcagtggctgtctctcctctgtgcagtttaaccacattgctccatta
aaagctgcattgctctaccctgattcagccccagtcacagtgaaaggacagctgtttgag
tctcattgtggagcttcttcagaagctgatccatcctcaattgaaagaacgcattccttg
tcagatcattctggtccattagatgagggtgagccaatagtaaatgcaatcaggagcgac
tctgctcttattggaggagtgatagccgtcatcatatttgtcatcctttgtgttgtcgca
gtaatggcacggtttttatgtcaacgaaaagaaacctatcggaacagggaagcaaaggga
caacagcatgacgacaactcaggccttgctttaaaaaatgaactcaactcacagaataca
ctgagtgaaaatcaaagggaatacttcatatga
DBGET
integrated database retrieval system
