Polyodon spathula (Mississippi paddlefish): 121302005
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Entry
121302005 CDS
T07273
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1-like isoform X1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04260
Cardiac muscle contraction
pspa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121302005
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121302005
04261 Adrenergic signaling in cardiomyocytes
121302005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121302005
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121302005
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
121302005
NCBI-ProteinID:
XP_041087713
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Position
28:complement(686889..707642)
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AA seq
545 aa
AA seq
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MHTDPINTPSSRGPARAPAWVRGDPQILTLNMHTDPLNTPSSRGPARAPAWVRGDPQILT
LNMHTDPLNKPSSRGPARAPAWVRGDPQILTLNMHTDPLNTPSSRGPARSPAWVRGDPQI
LTLNMHTDPLNTPSSRGPARAPAWVRGDPQILTLNMHTDPLNTPSSRGPARAPVWVRGDP
QILTLNMHTDPLNTPSSRGPARAPAWVRGDPQILTLNMHTDPLNTPSSRGPARAPAWSEI
ERIFELARTLQLVALDADTINHPSQLAKTSLAPIVVYIKIASPKVLQRLIKSRGKSQAKH
LNVQMVAADKLAQCPPELFDIILDENQLEDACEHLSEYLEAFWKATHPPSSNPPNPLLNR
TMATAALDASPAPVSNLQVQGSYLEHRQQPGFRDGPLTDRTGLREYQPYLGKQQQQPYLC
AVRPPGQGGGRGLSRQDTFDSETQGSRESAYTEGRDSCMDIETDPCEEPEPYRSANLGQQ
RQQASWEDEGTEPDQENLNRAHLHSQQVRARERERCCQNTDLEEPMMGQNRNEGVEEWGR
DVYIL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcatactgatcccataaacacaccatcatcgagaggtccagcacgcgctccagcctgg
gtaagaggggacccccaaatactgaccctgaacatgcatactgatcccctaaacacacca
tcatcgagaggtccagcacgcgctccagcctgggtaagaggggacccccaaatactgacc
ctgaacatgcacactgatcccctaaacaaaccatcatcgagaggtccagcacgcgctcca
gcctgggtaagaggggacccccaaatactgaccctgaacatgcacactgatcccctaaac
acaccatcatcgagaggtccagcacgctctccagcctgggtaagaggggacccccaaata
ctgaccctgaacatgcatactgatcccctaaacacaccatcatcgagaggtccagcacgc
gctccagcctgggtaagaggggacccccaaatactgaccctgaacatgcacactgatccc
ttaaacacaccgtcatcgagaggtccagcacgcgctccagtctgggtaagaggggacccc
caaatactgaccctgaacatgcacactgatcccctaaacacaccgtcatcgagaggtcca
gcacgcgctccagcctgggtaagaggggacccccaaatactgaccctgaacatgcacact
gatcccctaaacacaccatcatcgagaggtccagcacgcgctccagcctggagtgagatc
gagcggatctttgagctggcccggaccctgcagctcgtggctctcgatgccgacaccatc
aaccacccctcccagctcgccaagacctccctggcacccatcgtggtgtacatcaagatc
gcctctcccaaggtgctgcagaggctgatcaagtcccgggggaagtctcaggccaaacac
ctcaatgtgcagatggtggcggcagacaaattggcacagtgcccccctgagctgtttgac
atcatcctggatgagaaccagctggaggatgcctgtgagcacctgtctgagtacttggag
gcgttctggaaagccacgcaccccccgagcagcaacccgcccaaccccctgctgaaccgc
accatggccaccgccgcgctggacgccagcccagctcccgtctccaacctgcaggtccag
ggctcctacctggagcacaggcagcagcctgggttccgagacgggcccctgacggaccgg
accgggctgagggagtaccagccctacctaggcaagcagcagcagcagccctacctgtgc
gctgtgaggcccccgggccaaggagggggcaggggtctgtctcgccaggacaccttcgat
tcagagacccagggcagccgcgagtctgcctacacagagggaagggactcctgcatggac
atagagacagacccctgtgaggagcctgagccctaccgcagtgccaacctgggccagcag
cgacagcaggcctcctgggaggacgaggggaccgaaccggaccaggagaacctgaaccgg
gcccacctacacagccagcaggtccgggccagggagagggagcggtgctgccagaacacg
gatctggaggagcccatgatgggtcagaaccgcaatgagggtgtggaggagtgggggaga
gatgtgtacatcctctag
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