Polyodon spathula (Mississippi paddlefish): 121302034
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Entry
121302034 CDS
T07273
Symbol
hrob
Name
(RefSeq) homologous recombination OB-fold protein isoform X1
KO
K27803
homologous recombination OB-fold protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121302034 (hrob)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121302034 (hrob)
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GFIT
Motif
Pfam:
HROB
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
121302034
NCBI-ProteinID:
XP_041087763
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Position
28:complement(6931462..6944648)
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AA seq
664 aa
AA seq
DB search
MACSWSKLFNVGEEFEDEDFLSAVVDLETKIGTSPVAPASVTIHHVGAGLRAPTTASLQT
PSVKPRHLQHLPETSPSLSPNSPVLQTSKHGTPDSEIQLSSVTAQQQNGASKFRFVSKAN
SFITGNPQGVDADDFDNLDLSLPAYKEPIAVGSGSVSEQAVRENKRPEIHGFTVSSTRTP
QMRPRVDSAFHESAAKRPRDSDPGRHQDGRSRFLQTSTSEYTVPESSDNQTNCLRKMGEI
PVSGSMQTNIPQATPLTVCPAPSSPRRQALRPVAACLRSPSFSYTPNRTPNNPRLARPPT
PAQNYIYPSSAGSSRPAWSPKEPPTIQPTTPVSAPRMPCSPAATPSSLQTPVYTNHLVQL
VSAANKTPQSAAWGTPRAKTRRFPGPAGILPKQLTGRNLEEVMVSAPQTPAHGALAKLQP
QQSPSSQQMVEDEFERGPWTAMKTELGLDEKNPSSFLRTYSIIMVLRKAALKQLPKNKVP
NMAVVVKSLTRTNSDARAVFRDPTGEIQGTVHRQLLEERQPELKSGAVLLLKQVGVFSPS
HRNHYLNVTPNNLLRIYSPDGTEWASSQLPQNALNKTCSGLEQSKCRSGGSIWRMDPSGR
RDENSNASKPSKEPLGSQLSLEPRRRGDTALRGPAGDLENSADWEADDLDNLLGELPEES
FSAF
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcagttggagcaagctgtttaatgttggagaggaatttgaagatgaggatttt
ctatcggcagtggtggatttggaaaccaaaataggcacttcccctgtagcgcccgcctct
gtgacaatacatcacgttggtgcaggtctcagagctccaacaacagccagcctgcaaacc
cccagtgtgaaaccaaggcaccttcagcatcttccagaaacatcaccatccctatcgcca
aacagtccggtcctacagaccagtaaacatggcaccccagactcagaaatacagctttct
agtgtcactgcacagcaacagaacggtgcgtctaagttcagatttgtgagcaaggcaaac
tcatttatcactggcaaccctcagggtgtggatgcagatgactttgacaacctagatctc
tctctgccagcttacaaagaacccattgctgtggggagtgggtcagtttctgaacaggca
gtgcgagagaacaagcgccctgaaatacacggcttcactgtgtcatcaactagaactcca
cagatgcgccccagagtggattctgcttttcacgagtccgcagcgaaacggccgcgtgat
tccgatccgggccgtcatcaggatgggaggtccaggtttcttcagacttccacttcagaa
tacacagttcctgaaagctcagacaatcaaaccaattgcttacgcaaaatgggagagatt
cctgtctccggcagtatgcaaacaaacattcctcaagcaactccgttaactgtttgtcca
gctccttcatcacccagaagacaggcactaagaccagtagcagcctgcttaaggagtccg
agttttagctacacacccaatagaacgcctaataacccccggcttgcaagaccaccgacc
ccagctcaaaattacatctaccccagcagtgcaggttctagcagaccagcctggtccccc
aaggaaccccctaccatccagcccaccactccagtatcggccccgaggatgccctgttcc
cctgcagccactcccagctccctgcagaccccagtctacacaaaccacttagtgcagctg
gtctcggcagctaacaagaccccccagtctgctgcctggggcaccccccgggccaagacc
aggcgcttcccagggccagcggggattctgcccaagcagctcactgggagaaacctggaa
gaagtcatggtctctgctccacagaccccagcgcatggagctctagcgaagctgcagccc
cagcagagcccaagttctcagcagatggtggaagatgagtttgaacgaggtccttggaca
gcaatgaagactgagctaggactggatgagaagaatccctccagctttctccgaacatac
agtattatcatggtgctccgcaaggctgctttaaaacagctccctaaaaacaaggtgccc
aacatggcggtggtggtgaaatcacttacacgcacaaacagcgacgccagggctgtgttc
agggacccaacgggagagattcaagggactgttcataggcagctactggaggagaggcag
cctgaactgaagagtggtgccgtgctgcttctaaagcaggttggagtgttttccccatcc
catcgtaatcattacttgaacgtgaccccgaacaacttgctcagaatttactcccctgac
gggacagagtgggcctccagccagctgccccagaatgcactgaacaagacctgctcaggc
ctggagcagtcaaagtgcagatctgggggcagcatctggagaatggacccgagtggccga
cgggatgagaacagcaatgccagcaagccttctaaagagccgctcggttcacagctcagt
cttgaacccagaaggaggggggacacagccctgcgaggcccagcaggagatctagagaac
agtgcagattgggaagcagacgacctagataacctgctgggagagctccctgaagagtcc
ttctctgctttctaa
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