Polyodon spathula (Mississippi paddlefish): 121302093
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Entry
121302093 CDS
T07273
Symbol
arhgef11
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 11
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
121302093 (arhgef11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121302093 (arhgef11)
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121302093 (arhgef11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
121302093
NCBI-ProteinID:
XP_041087848
LinkDB
All DBs
Position
29:272026..304466
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AA seq
1476 aa
AA seq
DB search
MNLRTPASALDRSASKRQPHLPSPLAAWLSSLSMGDSIPDRRNSANHQKESWLDCSTENT
GLVHRCVIVQKDQQGFGFTVCGDRIVLVQHVRPGGAAMKAGLHEGDRIIKVNGSLVSSLT
HQEVVRLIKSGHYVALTLQGPPHSTASLPLLTDASSNLRSGPGGLAPPPPPPPLPPNSAG
LSASDRITGPRPLQDSEVQKHGSQILRKMLKQEEAELQELLEERSRNPSPSLEERIESAR
RRAKQVRVKIQQDVENSRSRSESSAGYLRAGEARLSMDSQDADSELFLSESPRSSPLLPV
RTSHHRRHGSDAAFTSEQVSRPQIIGPEEEEDDEESYLQNEMDGPFQDIDRLKSRPAHMA
VFMRYIFGQLLDPNPLLFYLSVEAYLCSSQKDARSLALQISAHFLEKDAPLKIRVPEDIN
TEIESRIQSQEDIRGPLSDLQHLVLPEIQDQIQDYRSKQMMGLGSLFGEGDLQQLDGDPS
REKQIVDKQATALWEILSKHEEDRSSPMAAAVLLYLRHAGIKLRDSRVFNLLEKPQEREK
WLPFFPKTKKPSSAKKDKEKERDSGEDKKRNPILKYIAKPKGGSSQSTFHVPLSLVEEVH
ASSSSTEVLPGSVRNMILQFENNHEYDSPDPNTQRLSTGSLTEPLLDSDRAAGSVKLARS
ESLKTQGELRKPRVEAVPRSRSDVDMEGAAEEREREGEGPRLHQSASSSASSLSARSVEN
QTPPYTPKLRRRSMDSPNSMYPENLLPNQSEDDPESQNWQETVGRDVLSTLEPREIDRQA
VIYELFTTELSHLRTLRVLDQVFYQKMKTVLNSEELNCIFPNLPAVIDLHASLCDSMKRL
RDSSFVNAIGDIMLARFEGLAGEGFQEVVSQFCSHQAQALELIKNKQRKEPRFQQLIQEC
EANPQCRRLQLKDLLVSEMQRLTKYPLLLGNIIKYTDSLNPDLPLLKCAQHCCRGILKLV
NQAVKETENRHRLDQYQRKLDLTPLERTTNPVAAQFKNLDLTTKRMIHEGPLTWRVSKDK
TIELQALLLEDLLVLLQRVDDRLVLRCPTKTLGGGSDLKMFFSPIVRLDSVLVRWWTDKK
ALFIISTSERQIYELVAGTSSEKNTWKDLLEEAVSLATQSQAPANHRPAAVSSSSLDLEP
ESSGTAGSADYNSEPLVEPSVSMETETLEDTDVVTTPTPPVDQSEGSIDDVTEHGSESAA
PSFAGGIADAALQDVENLRKLIFKNVRCGRCDGSLDTATEIPGETRSSPPIPTRGRDQEA
RNHAPNPRGKQSAPRGTEAPPLKDPSFRVVRKAEGAGTSTFTDDVTLDSSQSGGCSQTDE
LKGGGVGRDGNTFYLAVTTGPVESSTDEPSACNVPAGRDDAQVGRGGGEDAREARPSQWE
HGTESHVVRNVDAIFVTIENLTVKLHKLREIEAAHYHLLKTLARGPVSQGGASPDQTSAQ
HPTAAVRTRAFDRGAGDGKEGNPTDLVQPETRSTGF
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcggacacccgcttcggctctggatagatcagccagtaagagacagcctcac
ctgcccagtcctctcgctgcctggttgagcagcttgtcaatgggggattcgattcccgac
cgcaggaattcagccaaccaccagaaggagtcctggctagactgctcgactgagaacaca
ggcctggttcacaggtgtgtgatcgttcagaaggaccagcaaggcttcggcttcaccgtg
tgcggagatcggatcgtactagtgcagcatgtccggcctgggggcgctgcgatgaaagca
ggcttgcacgagggggacagaatcatcaaggtcaatggctccctggtgtcttcgctgact
catcaggaagtggttcgtctcattaaatctggtcattacgtggccctgaccctgcaaggc
ccgccccactccactgcttccctgcctctactgacagacgcctcgtccaatctgaggtca
ggaccggggggtctggccccgccccctcctccgcccccgctccccccgaattccgctggc
ctttctgcctcagaccggatcaccggccccagaccactacaggactctgaagttcagaag
cacggcagtcagattctcaggaagatgctgaagcaggaagaggcggagttacaggagctg
ttggaggagcgctctcggaacccctccccctctctcgaggagcgaatcgaaagtgctcgg
aggcgggccaagcaagtccgtgtcaagatacagcaggatgtggagaacagcaggtccaga
tctgagtcaagtgctgggtatctaagagccggggaagctcgattgtctatggactctcaa
gatgccgattcagagctcttccttagcgaaagcccccggtcctccccgctgctcccagtc
cggacgtcccatcacagaagacacggatcagatgccgccttcacctcagaacaggtttcc
agacctcagatcatcggaccagaggaggaggaggacgatgaagagtcctacctccagaac
gagatggacggcccgttccaagacatcgacaggttgaaatctcgcccagctcacatggcg
gtcttcatgagatacatcttcggccagctgctggatccaaaccctctgttgttctatctg
tcagtggaagcctatctctgctccagtcagaaggacgctcgctcactggcattgcagatc
tctgctcattttctagagaaggacgcgccactaaaaatccgggttccagaagacattaac
actgaaatagagagcagaattcagagccaggaagatattcgcggtccactgtcggacctt
cagcacttagttctgccggaaatccaggatcagattcaggactacaggagcaaacagatg
atgggtttgggcagcctgtttggagaaggggatcttcagcagcttgatggagacccaagc
agagagaaacagattgtggataagcaggccactgcactgtgggagatcctgtcgaaacac
gaggaggatagaagctctcccatggcagcggctgtgctgctgtatttgaggcacgcaggg
atcaagctgcgagactccagggtcttcaacctgctggagaagccgcaggagagagagaag
tggctgccgttcttcccaaaaaccaagaagcccagctctgcaaagaaggacaaggagaaa
gagagggacagcggggaagacaagaaacgtaaccccatcctgaaatacatcgccaagcct
aagggaggctcctcgcagtccacatttcatgttcctttgtcgctggtggaagaagttcat
gcttcttcatcctccacagaagttcttcctgggagtgtccgaaatatgattctgcaattt
gagaacaaccacgagtatgactcgcccgacccgaacacccagcgcctgtccactgggagc
ctgactgaacccttactggacagtgacagggctgctggctctgtgaagctggcgcgctct
gagtcgttgaagacccagggggagctcaggaagccccgcgtggaggcggtgcctcggtcc
cgcagcgacgtcgacatggagggcgccgcagaggagagggagcgggagggggaggggccc
cggctgcaccaatcagcttcctcctctgcctccagcctctcggccaggtctgtggaaaac
cagaccccaccttacaccccgaaattgagacgcagaagtatggactccccgaattcaatg
taccccgaaaatctgctccccaatcagtcggaggacgaccccgagtctcagaactggcaa
gagacggtggggcgggacgtcctgtcaacgctcgagcccagagagattgacaggcaggcc
gtcatatatgaactgttcacgaccgagttgtcacaccttcggacgctgcgggttttagac
caagtcttttatcagaagatgaaaacagttttaaactcggaggagctgaattgcatattc
cccaatttgcctgcagtcattgatcttcacgcttcgctttgtgattccatgaagagactc
cgggattcgtcgtttgtaaacgccattggtgacatcatgcttgcacggtttgaaggcttg
gccggggagggtttccaggaggtcgtgtctcagttctgcagccaccaagcccaggccctg
gagctgatcaagaacaagcagaggaaagaaccgcgattccagcaactaatacaggagtgt
gaagctaacccccagtgcaggaggttgcagttaaaggatctgctggtctctgaaatgcag
aggctgacgaagtacccattgctgctgggcaatatcatcaagtacactgacagtttgaac
ccagacctgcctctgctgaagtgtgcccagcattgctgccgcgggatcctgaagctggtc
aaccaggccgtcaaagagacggagaacaggcaccggctggaccaataccagcgcaagctg
gacctcacccctctggagaggacaaccaatcccgtcgcagcacagttcaagaacctcgac
ctgaccacaaaacgaatgatccacgaaggacccttgacgtggagggtgagcaaggacaaa
accatcgagctgcaagcgctcctgttggaagatctgctggtcctgctgcagcgagtcgat
gacaggctggtcctgcgatgccccaccaagacactgggaggaggatcggacctcaaaatg
ttcttcagtcccatcgtccgactggattcggtgctcgtccgatggtggacggacaagaag
gctttgtttataatcagcacgtcagaaaggcagatctatgaactggtggctggaacttca
tcagagaaaaacacttggaaggacttgttggaagaagccgtctcattggccacacagtca
caagctccagccaatcacaggccagctgctgtaagctcgtccagtttggatctggaaccc
gagtcttcggggacagctggaagcgcggactataactcggaacccctggtcgagccttct
gtttccatggaaaccgagaccctggaggacaccgatgtggtgaccacgcccacacctcca
gttgatcaatcggagggcagtatcgatgacgtcacggagcacggttccgaatctgcggct
cccagcttcgcaggagggattgcagacgctgcattgcaagatgtcgagaatcttcgcaag
ttgattttcaagaacgttcgctgcggacggtgcgatggctctctggacacggccacggag
attccaggagagactcgctcctcccctccaatcccgacccgggggcgtgatcaagaagcc
agaaaccacgcccccaatcccagagggaaacaatcagcacctcggggaacagaagcccct
cccctgaaggacccgagcttcagggtggtacggaaagctgagggggcgggcacttctact
ttcactgatgatgtcaccctagactccagccaatctggtggctgttcacagacagacgag
ctgaaggggggaggagtcggtcgagacggaaacacgttttatctggcggtgacgacagga
cctgtggagtccagcacagatgagccctctgcatgcaacgtgcccgcagggagggacgac
gcccaggtgggacgggggggaggcgaggacgcccgggaagcaaggccgagccaatgggag
cacgggactgagagccacgtggtccgaaacgtggacgccatctttgtaaccattgagaat
ttgaccgtcaaactgcacaagctgcgggagatcgaagccgcccattaccatctgttgaag
acgctggcccgcggtccggtcagtcaggggggcgcgagtccagatcagacctctgcacag
catcccacagcagccgtccggacaagagcctttgatcggggagcaggggatggtaaagag
ggcaacccgacagatctcgttcaaccagaaactcgatcgacaggcttttga
DBGET
integrated database retrieval system
