Polyodon spathula (Mississippi paddlefish): 121302134
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Entry
121302134 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A-like
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121302134
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121302134
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
121302134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
YwqJ-deaminase
Motif
Other DBs
NCBI-GeneID:
121302134
NCBI-ProteinID:
XP_041087888
LinkDB
All DBs
Position
29:complement(2066590..2087398)
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AA seq
752 aa
AA seq
DB search
MSGLKRPAGSEPSTSAPPEKKRERERDGGGGGGEEGGRTTVETVIKVGGVSSTEELDVRA
LQVRNRKLAETLDQRQLIEDELRETIERLERRQATDDASLLILNRYWSQFDENIRLIIHR
YDLDSELSDLLSDRKALDPSERKSLEPSDPEPDSDSNPERGSVREREREERGEGRERRRG
QRRGGALAPLSFLATLASSSSDEMEAALQERVESSHRLTERVLEICDSFHSATMRLGGDI
ADSDRFPDAVRELNSLLSRENQRLEQLRDSLQEKHSSLSSQFSVLGMQVEADRRVSELQS
RIEDLQWDIDSLSDVSPLSFEEMNSDLEENRELAENRLSELQKLKQDLHQINSENSNMKV
QLVSKAQVVVKECSEYRCLQSQFSVLYNESLQHKAQLDEARSRLQGTRGIRLRQLDHMEH
DELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLISSLQN
HNQHMKGEVQKYKRRLRDAHTELSQARAQRGSALLQPQSSMELDLKDDTSCSPLTLTPST
SCDLSMKAEPDSGPRSGDLIPSLSCLSPGLVGTATVKAEPVLEGEGPVQGGGSVVKEEER
ERGMGKGGGVGVKEERERPHSQSEEPDRAGGGAKPSRKEQEQLKVVRAELKKAQESQKEM
KLLLDMYRSAPKEQRDKVQLMAAESFWKAEIEALSQRLRELEERERREGKKMADEDALRK
MRSVEEQREHLTKKLSIAKQVRLFCLSLQGRE
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggactgaagaggccggcagggagtgagccctcgacctccgcccctccggagaag
aagagagagagggagcgagatggaggaggaggaggaggagaggaagggggcaggaccacc
gtggagactgtcatcaaagtgggaggagtctcgagcacggaggagctggatgtccgggct
ctgcaggtgaggaacaggaagctggctgagacgctggaccagcggcagctgatcgaggat
gagctgcgagagacgatcgagcgtctggagaggaggcaggcgaccgacgacgccagcttg
ctcatcctgaaccgctactggagccagtttgatgagaatatccgtctcatcattcatcga
tatgatctggactcagaactctcagacctgctgagtgacaggaaggctctagatccttcg
gagcgcaagagtctagaaccctcggacccagaaccggactccgacagcaacccggagaga
ggaagtgtgcgagagagggagagggaggagagaggagaggggagagagagaaggagaggg
cagagaagaggaggagcattagcgcccctctccttcctcgccactctggccagcagcagc
agtgatgagatggaggcagccctgcaggagagggtagagtcgagccaccggctcactgag
agggtgctggagatctgcgacagctttcacagcgccaccatgaggttgggaggagacatc
gcagactcggatcgcttccctgacgcagtgagagagttgaactccctgctctccagagag
aaccagagactggaacagctaagagactcactgcaggagaagcacagctctctctcctct
cagttctcagtgctggggatgcaggttgaagctgatcggcgtgtctcggagctccagtct
cggattgaggacctgcagtgggacatcgactctctgagcgacgtctctcctctgtctttt
gaggagatgaactctgacctggaggagaatcgagagcttgctgagaacagactgtcagaa
ctacagaaactgaagcaggaccttcatcagataaacagcgaaaacagcaatatgaaggtg
cagttggtctctaaggcacaagtggtagttaaagagtgctcagagtatcgctgtctccag
tcccagttctctgtcctctacaacgagtctctgcagcacaaagcccagctggacgaggcc
cggtcaagactgcaggggacccgggggatccgcctgagacagctggaccacatggagcat
gatgagctctctcttcagaagaagttgcgcacggaggtgattcagctggaggacacgctg
gctcaggtgcggaaggagtacgagatgctgaggatcgaattcgagcagacgctagccgcc
aatgagcaagcaggtcccattaacagggagatgcgtcatctgatcagcagcctgcagaat
cacaaccagcacatgaagggagaggttcagaaatacaagcgcaggctgagagacgcacac
acagagctgagccaagctcgtgcccagcgaggctccgccctcctgcagcctcagtcaagt
atggaactcgacctcaaagacgacacttcctgttcacccctgaccctcaccccttccact
tcctgtgacctgagcatgaaggcggagccggattccgggcctaggtccggggatctgata
cccagtctctcttgtctttctccaggtctggtaggcacggcgacagtgaaggcggagcca
gtgcttgagggggaggggcctgtgcagggaggggggagtgtggtgaaagaggaggagaga
gagaggggtatggggaaaggaggtggggttggggtgaaggaggagagggagaggccacac
agccaatcagaagagccggaccgagcagggggcggagccaagcccagcaggaaggagcaa
gaacagttgaaagttgtgagggcggagcttaagaaggcgcaggagtcccagaaggagatg
aagctgctgttggatatgtaccgctccgcccccaaggaacagagagacaaagtgcagctc
atggcagccgagagcttctggaaagcagagattgaggcgctgagtcagaggctgagggag
ctggaggagagggagaggagggaggggaagaagatggccgatgaagatgctctgaggaag
atgaggagcgtagaggagcagcgagagcacctgaccaagaaactgtctatcgcaaaacag
gtccgtctgttctgtctctctctgcagggacgggaatga
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