Polyodon spathula (Mississippi paddlefish): 121302173
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Entry
121302173 CDS
T07273
Name
(RefSeq) nodal homolog 2-A-like
KO
K04666
nodal
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121302173
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121302173
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121302173
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Transforming growth factors (RSTK binding)
121302173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
121302173
NCBI-ProteinID:
XP_041087924
LinkDB
All DBs
Position
29:complement(5402188..5404014)
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AA seq
420 aa
AA seq
DB search
MEPRAALLGLSRGPSGNNGAASSSGPGAGVQTSMVSELGYKNAYHSLRYPLYMMQLYRSF
KTGDSTRATAAATASNIEENPVLHEADSVLSLIAKSCSQIGDKWTVTFDMSSISANEDVQ
LSELRVRIPHFSTSGKVSVEIYHSHDRKCAGKEDRTCQDRLFLGSFGASPTDTNSAWKVF
NVTAMLKYWLHQGASFPNGAEAPVRGESHLGEPDQGDTAAPEHRHRLRHQGSRGKVHHNT
VDRVMMVVFSKQNESSLAAGAPTLIRAVEHSKYVVMDKGVVGDSGRRHKRNRKDRERVKL
AGSIGDGVAAPAEGNLKPLCRKVDMWVDFEQIGWNDWIVYPKRYNAFRCEGDCPSPVDES
FQPTNHAYMQSLLKLYQPSRVPCPSCVPTKLSPQSMLYYENGEVVLRHHEDMIVEECGCH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaacccagggcggctctcctaggactgtcccgaggacctagcggcaacaacggagcc
gccagcagcagtggacccggtgccggcgtgcagacctccatggtatcggagctcggatac
aaaaacgcttaccacagtctcagataccccctgtacatgatgcagctgtaccgctctttc
aagaccggagacagcaccagggcaacggccgcagcaaccgccagcaacattgaggagaac
ccggtgctgcacgaagcagattcagtcctgagcttgattgcaaaaagttgcagtcaaata
ggcgacaaatggaccgtcactttcgacatgtcttccatttcggccaacgaggatgtccag
ctgtccgaattgcgggtcaggatccctcatttctcaacgtccggcaaggtgtctgtggag
atctaccactcccacgatcgcaagtgcgctggcaaggaggacagaacctgtcaggaccgc
ctcttcctcggcagcttcggcgcctcgcccaccgataccaactccgcctggaaggtcttc
aacgtgacggccatgctgaagtactggctgcaccaaggagcgagcttccctaacggagcc
gaggccccggttaggggtgagtcccacctcggcgagcccgaccagggggacaccgctgct
ccggagcacaggcacaggctgcggcaccagggaagccggggaaaggtgcaccacaacacg
gtggacagagtcatgatggtggtcttctccaagcagaacgaatccagcctcgccgcggga
gccccgaccctcattcgcgcagtggagcactccaagtatgtggtgatggacaagggcgtg
gtgggagacagcgggcgcaggcacaagaggaaccgcaaggaccgggaaagagtgaagctg
gcgggcagcatcggagacggggtcgccgccccggctgaagggaacctcaaacccctctgc
aggaaggtggacatgtgggtcgatttcgagcagataggctggaacgactggatcgtctac
cccaagaggtacaacgcgttcaggtgcgagggggactgtcccagcccggtggacgagtcc
tttcagcccacaaaccacgcatacatgcagagtttgctgaagttgtaccagccgagtcga
gtaccttgtccgtcgtgcgtcccgaccaagctcagcccgcagtccatgctgtactacgag
aacggagaggtcgttctccgtcaccacgaagacatgatagtggaagaatgtggatgccat
taa
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