Polyodon spathula (Mississippi paddlefish): 121302234
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Entry
121302234 CDS
T07273
Name
(RefSeq) STAM-binding protein-like A isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121302234
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121302234
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121302234
04121 Ubiquitin system [BR:
pspa04121
]
121302234
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121302234
Peptidases and inhibitors [BR:
pspa01002
]
Metallo peptidases
Family M67
121302234
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
Others
121302234
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
121302234
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP8_dimer
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
121302234
NCBI-ProteinID:
XP_041088002
LinkDB
All DBs
Position
29:7906300..7913573
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AA seq
419 aa
AA seq
DB search
MPEYSDVSLTPEERVRALTEMGSSVPVNEDVPPRRYFRSGMEIIRMANIYTEEGNMEHAF
ILYNKYITLFIEKLPKHRDYKTANIPEKKETMKKLKEIAFPQAEALKKELLKRYVKEHTE
YLQSKSAEMAELAREQSRQKELETERQRVEEQRRRQQEQEQFNAFEEMIRRQELEKERLR
IQQEFSTAPPSETPLLPGIQGPPLPPSATPTPPPSTAATHPPGPTPSVDRSLKPGSLVSP
GRSVMVEGLQPLVVPRELCSKFMKLAEANTARAVETCGILCGKLTRSEFTITHVIVPKQR
GGPDSCDTENEEELFIIQDELSLITLGWIHTHPTQTAFLSSVDMHTQCSYQMMLPESIAI
VISPKFNETGYFKLTEHGMEEISSCKQKGFHPHPKEPPLFTSCGHLTISDSSVTVMDLR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgccggagtacagtgatgtgagtctgactccggaggagcgggtccgagccctcacggag
atgggaagctctgtgccagtgaatgaagacgtgcccccgcgcagatacttccgctcgggc
atggagatcatccgcatggccaacatctacacggaggaggggaacatggagcacgccttc
atcctctacaacaagtacatcacgctcttcattgaaaagcttcccaaacatcgagattac
aaaaccgccaacattcctgaaaaaaaggagaccatgaagaagctgaaagagattgcgttc
cctcaggctgaggcgctgaagaaagagctgctgaagagatacgtaaaggagcacactgag
tacctgcagagcaagagtgcggagatggccgagctggctcgggagcagtcccgtcagaag
gagttggagacggagaggcagcgcgtggaggagcagcggcgcaggcagcaggagcaggag
cagttcaatgccttcgaggagatgatccgccgccaggagctggagaaggagaggctgagg
atccagcaagagttcagcaccgcccctccctccgagacccccctcctccctggaatacag
ggccctccactgcccccctctgcaacccccaccccgcctccgagcaccgcagccacacac
cctcccggacccacgccctccgtcgaccgctcgctcaaaccgggctcgctcgtcagccct
gggagaagtgtgatggtggaggggctgcagcccctggtggttccccgggagctgtgcagc
aagttcatgaagctggctgaggccaacactgcccgagccgtggagacgtgcggcattctc
tgtggaaaactgacgcgcagtgagttcacgatcacccacgtgatcgtgccgaagcagagg
ggcgggccggattcctgcgacacggagaacgaggaggaactcttcatcatccaggacgag
ctgagcctcatcactctgggctggattcacacacacccgacacagacagccttcctgtcc
agtgtggacatgcacacacagtgctcctaccagatgatgctgccggagtccatagccatc
gtcatctcgcccaaattcaacgagactggctacttcaagctgactgagcacggtatggag
gagatctcatcctgcaaacagaagggctttcacccgcaccccaaggagcccccactcttc
acttcttgtgggcacctcaccatcagtgacagcagtgtgacggtgatggacctgcggtga
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