Polyodon spathula (Mississippi paddlefish): 121302267
Help
Entry
121302267 CDS
T07273
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 19-like
KO
K08633
a disintegrin and metalloproteinase with thrombospondin motifs 19 [EC:3.4.24.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121302267
Peptidases and inhibitors [BR:
pspa01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121302267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_C
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_5
TSP1_spondin
Reprolysin_3
Pep_M12B_propep
TSP1_CCN
Reprolysin_2
Reprolysin_4
ADAMTS_CR_3
Peptidase_M10
DUF3810
PLAC
Motif
Other DBs
NCBI-GeneID:
121302267
NCBI-ProteinID:
XP_041088050
LinkDB
All DBs
Position
2:complement(82856875..82961293)
Genome browser
AA seq
1138 aa
AA seq
DB search
MHLGHICGILQQLWFLTATVASGSHFFQDLESETVYPLVLPDAAPPGPGRFDSQERYPHA
GSSSREVRSISKGEEYETQELYHWEPLGPQTLAFPGLRLKIPAFGSELHLILKRDSRFLS
QKFVVENRLKGRKAYLDNSTATSSSAERSCYYSGAVLNSTGSIASFSTCGGLMGFIQLNE
DFLFIEPLKRTLAVTGHAHRVYRRKRSVEEKVSEKHSSHKYCGVLPDKRKSKNRQLTEIG
RGKRYSYKLPHDYNVETLVVADPAMVSYHGSDAAKRFILTIMNMVFNLFQHKSLGVQMNI
RLTKLVLLHETPANMYIGHHGEKMLESFCKWQQEEFGKKNIHTDFSASWREDLPSIDTAI
LITRKDFCVHKDEPCDTVGIAYLSGMCSEKRKCILAEDNGLNLAFTIAHEMGHNMGINHD
NDHPSCADGLHIMSGEWIKGQNLGDVSWSQCSREDMERFLRSKASSCLLQTDPQSLNSVI
LPSTLPGMTYTADEQCQILFGPKASYCQKMQYVICSGLWCKVEGEKECKTKLDPPMDGTE
CDTGKWCKAGECVRKALLPAHTDGEWSSWSAWGACSRTCNTGVSVRQRSCDNPRPSTEGR
DCPGVRVQYQVCQNTLCPAGVPSFRDLQCQSFNRPLYQKHSFQWYSVTDNEKPCTLFCST
LGNDQPILLADKVLDGTLCGPQESDICANGTCQKISCDGILGSSAREDNCGLCNGNGKSC
KVIKGDFNHTRGAGYVEAVVIPAGARRIRVVEEKPAHSYLALRDASKHSINSDWKIEHPG
SFNIAGTTVHYVRRGLWEKISAKGPTTSPLHLLVLLFNDQNYGIHYEYTIPVDPPPENRS
AKTVEPLFMWTHSGWEDCHAVCGGGERKTKVTCTKIMNKTTSVVDNKKCRYLTKPEPQVR
KCNDQPCQTRWMMTEWTPCSRTCGKGSQARQVSCTQQLRNGTLIRAKERDCVGHKPAAAQ
RCEGQDCMTVWEAGVWSECSVKCGKGARHRTVKCTNPRKKCDLSTRPREVEDCEDYSKCY
VWRTGDWSKCSVTCGKGMQSRVIQCMHKITGRHGNECFSSEKPAAYRPCHLQPCNEKNNV
NTITSPRLAALTFKCLRDQWPVYCKVIREKNLCQDMRWYQRCCETCRDFYAQKMQQRS
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgggccacatctgtgggattttacagcagctgtggtttttgactgctacggta
gcttcaggttcacatttctttcaagacttggagtctgagacagtctaccctctggtttta
ccggatgccgctccgccgggtcctgggagattcgacagccaggagagatatccacatgca
ggcagcagttctcgggaagttcgctctatttccaaaggagaggaatacgaaacccaggag
ttataccactgggaacctcttggaccgcagacactggcttttccggggctcaggctcaaa
atacccgcctttggcagtgagctccacctgattctgaagagggacagcagatttttatca
cagaaattcgtggtagagaacagactgaaaggtcggaaagcgtacctggacaattcaaca
gctacctcttccagcgctgaaagatcgtgttactacagcggggctgttcttaattctaca
ggatccatcgcctcctttagcacctgtggtggtctgatgggatttattcagctcaatgag
gactttctatttattgaacctctaaagcgcacgctggcagtgacagggcacgcacaccgc
gtttacagacggaaacgatcagtggaggagaaagtctcagagaagcattcttcacataaa
tactgcggggttcttcctgataaaaggaaaagcaagaacagacagttgacagaaattgga
agagggaaaagatactcctataaattacctcatgactataacgtggagaccttggttgtt
gctgaccctgccatggtcagctatcatggttctgatgctgcaaagagattcatcctcaca
ataatgaatatggtttttaatctctttcaacacaagagccttggagtacaaatgaacatt
cgactgacaaagcttgtgctgcttcatgagactccagccaacatgtacatcggacatcat
ggagaaaagatgctggagagtttctgtaagtggcagcaggaagagtttggaaagaagaac
attcacactgacttctcagcgagctggagggaggatttaccgtccattgacactgctata
ttaatcaccagaaaggatttctgcgtacataaagatgaaccatgtgacactgtaggtata
gcatacttaagtgggatgtgcagtgagaagagaaagtgcatccttgctgaggacaatgga
cttaatctggcatttacaattgctcatgagatggggcacaacatggggataaatcatgac
aatgaccacccatcctgtgcagatggcctccatatcatgtctggggaatggattaaagga
cagaaccttggagacgtctcctggtctcaatgcagcagagaggacatggaaaggtttctc
aggtcaaaggcgagcagttgtttgctgcagacagatccccagagcctcaattctgtgatt
ctgccttccacattacctgggatgacgtacactgcagatgagcaatgtcagattctgttt
ggaccaaaagcttcttattgccagaaaatgcagtatgtaatttgctctgggctctggtgc
aaagtcgagggtgagaaagaatgtaagacgaaattggatccacccatggatggaacagag
tgtgacacaggaaagtggtgcaaagctggggaatgtgtcagaaaggctcttttacctgcg
cacacagatggggagtggagttcatggagtgcatggggagcctgcagcagaacctgtaac
accggggtcagtgtccgtcaacgcagttgtgataatcccagacccagcaccgaaggtaga
gactgtcctggtgttagagtccagtatcaagtgtgccagaacactctctgtccggcaggg
gtgccaagcttcagggatttacagtgccagtcctttaacagacctttgtatcagaagcac
tcgttccagtggtattctgtcacagataatgagaaaccctgcactttattctgctccaca
ttggggaacgaccagccaatactgctggctgacaaagtacttgatgggactctgtgtgga
cctcaggaatcagatatctgtgcaaacggcacgtgccagaaaatcagctgcgacggtata
ctgggatcttcagccagagaagataattgtggattgtgcaatggaaacggcaaatcatgc
aaagtcattaaaggagatttcaaccacaccaggggggcaggttatgttgaagcggtggtg
ataccagcaggagcaagaagaatcagagtagtggaggaaaaacctgcacacagctactta
gctctacgggatgccagtaaacactccatcaacagtgactggaagattgaacatccaggt
tcatttaacattgctgggacaacagtccactatgtcagaagaggattatgggagaaaatc
tctgccaaaggacccactacttctccgctccatcttttggtgctgctgtttaatgaccaa
aattatggaatccattatgagtacaccattcctgtagaccctcccccagagaaccggagt
gccaagaccgttgagcctctcttcatgtggacgcactctgggtgggaggactgtcacgct
gtgtgtggtggaggggaaaggaaaacaaaagttacttgcaccaagatcatgaataagact
accagtgtggtggacaacaagaagtgccgctacctgactaaacccgagccacaagtgcgc
aaatgcaatgaccagccctgccagacaaggtggatgatgacagagtggactccttgctca
aggacttgtggaaagggatctcaggctcgtcaggtgtcctgcactcagcagctacgtaat
gggactctcatcagggccaaagagcgggactgtgtgggacacaagccggctgcggcccag
cgctgtgaggggcaggactgtatgacagtgtgggaggctggagtctggtccgagtgctct
gtaaagtgtggcaaaggggcccgccacaggactgtgaaatgcaccaatcctcgcaagaaa
tgcgacttgtccacacgccccagggaggtggaagactgtgaggattactccaagtgctac
gtctggagaacaggagactggtccaagtgttcagtaacctgtggcaagggaatgcagtcc
agggtaattcaatgcatgcacaagatcactggaaggcatggaaatgaatgcttctcatcc
gagaaacccgctgcttaccgaccttgtcatctacaaccctgcaacgagaaaaataatgtg
aacaccatcacctcgcctagactggctgccttaacattcaagtgcctacgggaccagtgg
cctgtctactgtaaagtcatcagagagaagaacctctgtcaggacatgaggtggtaccag
cgctgctgtgagacctgtagggacttttatgcacaaaaaatgcagcaaagaagttga
DBGET
integrated database retrieval system
